Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LSMEM1Q8N8F7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.78■□□□□ 0.12
LSMEM1Q8N8F7 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.78■□□□□ 0.12
LSMEM1Q8N8F7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.78■□□□□ 0.12
LSMEM1Q8N8F7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.78■□□□□ 0.12
LSMEM1Q8N8F7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LSMEM1Q8N8F7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LSMEM1Q8N8F7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LSMEM1Q8N8F7 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LSMEM1Q8N8F7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LSMEM1Q8N8F7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LSMEM1Q8N8F7 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.78■□□□□ 0.12
LSMEM1Q8N8F7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LSMEM1Q8N8F7 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
LSMEM1Q8N8F7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LSMEM1Q8N8F7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
LSMEM1Q8N8F7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.77■□□□□ 0.12
LSMEM1Q8N8F7 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.77■□□□□ 0.12
LSMEM1Q8N8F7 SIGLEC16-201ENST00000599858 1437 ntBASIC15.77■□□□□ 0.12
LSMEM1Q8N8F7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
LSMEM1Q8N8F7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LSMEM1Q8N8F7 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LSMEM1Q8N8F7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LSMEM1Q8N8F7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LSMEM1Q8N8F7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LSMEM1Q8N8F7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LSMEM1Q8N8F7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LSMEM1Q8N8F7 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LSMEM1Q8N8F7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
LSMEM1Q8N8F7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LSMEM1Q8N8F7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.77■□□□□ 0.12
LSMEM1Q8N8F7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LSMEM1Q8N8F7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LSMEM1Q8N8F7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
LSMEM1Q8N8F7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.77■□□□□ 0.12
LSMEM1Q8N8F7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LSMEM1Q8N8F7 AL020989.1-201ENST00000422979 469 ntBASIC15.77■□□□□ 0.12
LSMEM1Q8N8F7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LSMEM1Q8N8F7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
LSMEM1Q8N8F7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LSMEM1Q8N8F7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.77■□□□□ 0.12
LSMEM1Q8N8F7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.77■□□□□ 0.12
LSMEM1Q8N8F7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.77■□□□□ 0.12
LSMEM1Q8N8F7 AL445228.2-201ENST00000605589 952 ntBASIC15.77■□□□□ 0.12
LSMEM1Q8N8F7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LSMEM1Q8N8F7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LSMEM1Q8N8F7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LSMEM1Q8N8F7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LSMEM1Q8N8F7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
LSMEM1Q8N8F7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.77■□□□□ 0.11
LSMEM1Q8N8F7 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.77■□□□□ 0.11
LSMEM1Q8N8F7 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.77■□□□□ 0.11
LSMEM1Q8N8F7 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.77■□□□□ 0.11
LSMEM1Q8N8F7 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.77■□□□□ 0.11
LSMEM1Q8N8F7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.11
LSMEM1Q8N8F7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
LSMEM1Q8N8F7 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.77■□□□□ 0.11
LSMEM1Q8N8F7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.77■□□□□ 0.11
LSMEM1Q8N8F7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
LSMEM1Q8N8F7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LSMEM1Q8N8F7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LSMEM1Q8N8F7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
LSMEM1Q8N8F7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.77■□□□□ 0.11
LSMEM1Q8N8F7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LSMEM1Q8N8F7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LSMEM1Q8N8F7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 SPDYE21P-201ENST00000413323 827 ntBASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 ABCD1P5-201ENST00000445663 754 ntBASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 SIGLEC30P-201ENST00000455569 941 ntBASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 MIR5100-201ENST00000579544 119 ntBASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 AC073592.4-201ENST00000623827 446 ntBASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 AC106886.4-201ENST00000623557 2502 ntBASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 AC105020.1-201ENST00000435356 2205 ntBASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms