Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 AL591684.3-201ENST00000605187 298 ntBASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKL3Q8IVW4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKL3Q8IVW4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDKL3Q8IVW4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKL3Q8IVW4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKL3Q8IVW4 AGGF1P2-201ENST00000426656 2106 ntBASIC17.66■□□□□ 0.42
CDKL3Q8IVW4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDKL3Q8IVW4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKL3Q8IVW4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKL3Q8IVW4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CDKL3Q8IVW4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKL3Q8IVW4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDKL3Q8IVW4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKL3Q8IVW4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.66■□□□□ 0.42
CDKL3Q8IVW4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.66■□□□□ 0.42
CDKL3Q8IVW4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.66■□□□□ 0.42
CDKL3Q8IVW4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CDKL3Q8IVW4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CDKL3Q8IVW4 AC138894.3-201ENST00000603787 634 ntBASIC17.66■□□□□ 0.42
CDKL3Q8IVW4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDKL3Q8IVW4 AC073592.4-201ENST00000623827 446 ntBASIC17.66■□□□□ 0.42
CDKL3Q8IVW4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.66■□□□□ 0.42
CDKL3Q8IVW4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
CDKL3Q8IVW4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKL3Q8IVW4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKL3Q8IVW4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKL3Q8IVW4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.66■□□□□ 0.42
CDKL3Q8IVW4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDKL3Q8IVW4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDKL3Q8IVW4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDKL3Q8IVW4 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKL3Q8IVW4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 AC010331.1-201ENST00000611423 582 ntBASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 AC079776.2-201ENST00000641154 1609 ntBASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CDKL3Q8IVW4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.64■□□□□ 0.42
CDKL3Q8IVW4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CDKL3Q8IVW4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL3Q8IVW4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.64■□□□□ 0.41
CDKL3Q8IVW4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.64■□□□□ 0.41
CDKL3Q8IVW4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms