Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 AGGF1P2-201ENST00000426656 2106 ntBASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
LINC00346Q8IVM7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 AC124067.4-201ENST00000519691 2379 ntBASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 ARMC10P1-201ENST00000313754 855 ntBASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 AC104819.1-201ENST00000504587 486 ntBASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 AL445228.2-201ENST00000605589 952 ntBASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 NPAP1P7-201ENST00000613027 823 ntBASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 UBALD1-205ENST00000590891 2641 ntBASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 EGFEM1P-202ENST00000431685 1563 ntBASIC15.24■□□□□ 0.03
LINC00346Q8IVM7 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 AC099336.1-202ENST00000602961 463 ntBASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 AC093458.2-201ENST00000623150 629 ntBASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LINC00346Q8IVM7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms