Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 AL157888.1-201ENST00000631930 593 ntBASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 AC008741.2-201ENST00000612792 3115 ntBASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CRLF3Q8IUI8 AC093525.9-201ENST00000624961 1746 ntBASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 SPDYE13P-201ENST00000445314 798 ntBASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 AC092053.1-201ENST00000605787 1936 ntBASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CRLF3Q8IUI8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CRLF3Q8IUI8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CRLF3Q8IUI8 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CRLF3Q8IUI8 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.2■□□□□ 0.34
CRLF3Q8IUI8 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.2■□□□□ 0.34
CRLF3Q8IUI8 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CRLF3Q8IUI8 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CRLF3Q8IUI8 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CRLF3Q8IUI8 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.2■□□□□ 0.34
CRLF3Q8IUI8 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.2■□□□□ 0.34
CRLF3Q8IUI8 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CRLF3Q8IUI8 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CRLF3Q8IUI8 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CRLF3Q8IUI8 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CRLF3Q8IUI8 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CRLF3Q8IUI8 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
CRLF3Q8IUI8 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CRLF3Q8IUI8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CRLF3Q8IUI8 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CRLF3Q8IUI8 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CRLF3Q8IUI8 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
CRLF3Q8IUI8 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms