Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11FIP4Q86YS3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11FIP4Q86YS3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11FIP4Q86YS3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11FIP4Q86YS3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11FIP4Q86YS3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.17■□□□□ 0.82
RAB11FIP4Q86YS3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.17■□□□□ 0.82
RAB11FIP4Q86YS3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11FIP4Q86YS3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.17■□□□□ 0.82
RAB11FIP4Q86YS3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11FIP4Q86YS3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.17■□□□□ 0.82
RAB11FIP4Q86YS3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.17■□□□□ 0.82
RAB11FIP4Q86YS3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.17■□□□□ 0.82
RAB11FIP4Q86YS3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
RAB11FIP4Q86YS3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11FIP4Q86YS3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RAB11FIP4Q86YS3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11FIP4Q86YS3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.17■□□□□ 0.82
RAB11FIP4Q86YS3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.17■□□□□ 0.82
RAB11FIP4Q86YS3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11FIP4Q86YS3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11FIP4Q86YS3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 ELK2BP-201ENST00000415014 1224 ntBASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 AC018712.1-201ENST00000455767 687 ntBASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 AC073648.2-201ENST00000510116 352 ntBASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 EGFEM1P-202ENST00000431685 1563 ntBASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 AC006504.4-201ENST00000592118 1568 ntBASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 LINC02012-201ENST00000608206 1725 ntBASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP4Q86YS3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 PRYP5-201ENST00000451909 266 ntBASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 AL160237.2-201ENST00000556165 472 ntBASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 AL353135.1-201ENST00000606729 504 ntBASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP4Q86YS3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
RAB11FIP4Q86YS3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RAB11FIP4Q86YS3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
RAB11FIP4Q86YS3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAB11FIP4Q86YS3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.14■□□□□ 0.81
RAB11FIP4Q86YS3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAB11FIP4Q86YS3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB11FIP4Q86YS3 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB11FIP4Q86YS3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms