Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC25Q86WR0 AL353692.3-201ENST00000407031 1396 ntBASIC17.8■□□□□ 0.44
CCDC25Q86WR0 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC25Q86WR0 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC25Q86WR0 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CCDC25Q86WR0 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CCDC25Q86WR0 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC25Q86WR0 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CCDC25Q86WR0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC25Q86WR0 TSPY26P-202ENST00000565928 3884 ntBASIC17.8■□□□□ 0.44
CCDC25Q86WR0 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC25Q86WR0 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC25Q86WR0 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC25Q86WR0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC25Q86WR0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC25Q86WR0 AP003733.1-201ENST00000491725 852 ntBASIC17.8■□□□□ 0.44
CCDC25Q86WR0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC25Q86WR0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC25Q86WR0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC25Q86WR0 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC25Q86WR0 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.8■□□□□ 0.44
CCDC25Q86WR0 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC25Q86WR0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC25Q86WR0 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC25Q86WR0 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC25Q86WR0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC25Q86WR0 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC25Q86WR0 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC25Q86WR0 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC25Q86WR0 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CCDC25Q86WR0 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CCDC25Q86WR0 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC25Q86WR0 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC25Q86WR0 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC25Q86WR0 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC25Q86WR0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC25Q86WR0 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 AC010460.3-201ENST00000511359 1579 ntBASIC17.79■□□□□ 0.44
CCDC25Q86WR0 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 KRT18P22-201ENST00000402024 1347 ntBASIC17.79■□□□□ 0.44
CCDC25Q86WR0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.79■□□□□ 0.44
CCDC25Q86WR0 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 IGHGP-201ENST00000390555 1178 ntBASIC17.79■□□□□ 0.44
CCDC25Q86WR0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 HLA-F-220ENST00000434407 884 ntBASIC17.79■□□□□ 0.44
CCDC25Q86WR0 AC068472.1-201ENST00000474589 881 ntBASIC17.79■□□□□ 0.44
CCDC25Q86WR0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
CCDC25Q86WR0 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC25Q86WR0 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
CCDC25Q86WR0 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC25Q86WR0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC25Q86WR0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC25Q86WR0 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC25Q86WR0 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC25Q86WR0 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC25Q86WR0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC25Q86WR0 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC25Q86WR0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms