Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 AC093458.2-201ENST00000623150 629 ntBASIC19.38■□□□□ 0.69
SHC4Q6S5L8 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
SHC4Q6S5L8 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.38■□□□□ 0.69
SHC4Q6S5L8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHC4Q6S5L8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SHC4Q6S5L8 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHC4Q6S5L8 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHC4Q6S5L8 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SHC4Q6S5L8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.37■□□□□ 0.69
SHC4Q6S5L8 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC4Q6S5L8 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC4Q6S5L8 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SHC4Q6S5L8 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC4Q6S5L8 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SHC4Q6S5L8 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SHC4Q6S5L8 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC4Q6S5L8 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.37■□□□□ 0.69
SHC4Q6S5L8 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.37■□□□□ 0.69
SHC4Q6S5L8 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.37■□□□□ 0.69
SHC4Q6S5L8 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC4Q6S5L8 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SHC4Q6S5L8 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC4Q6S5L8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SHC4Q6S5L8 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SHC4Q6S5L8 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.37■□□□□ 0.69
SHC4Q6S5L8 AC132008.2-207ENST00000454517 770 ntBASIC19.37■□□□□ 0.69
SHC4Q6S5L8 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.37■□□□□ 0.69
SHC4Q6S5L8 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC4Q6S5L8 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
SHC4Q6S5L8 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.37■□□□□ 0.69
SHC4Q6S5L8 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.37■□□□□ 0.69
SHC4Q6S5L8 AC010331.1-201ENST00000611423 582 ntBASIC19.37■□□□□ 0.69
SHC4Q6S5L8 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SHC4Q6S5L8 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC4Q6S5L8 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SHC4Q6S5L8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SHC4Q6S5L8 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SHC4Q6S5L8 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC4Q6S5L8 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC4Q6S5L8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC4Q6S5L8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC4Q6S5L8 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHC4Q6S5L8 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHC4Q6S5L8 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHC4Q6S5L8 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.36■□□□□ 0.69
SHC4Q6S5L8 HCG11-201ENST00000411553 5696 ntBASIC19.36■□□□□ 0.69
SHC4Q6S5L8 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHC4Q6S5L8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SHC4Q6S5L8 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SHC4Q6S5L8 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SHC4Q6S5L8 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SHC4Q6S5L8 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.36■□□□□ 0.69
SHC4Q6S5L8 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHC4Q6S5L8 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHC4Q6S5L8 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHC4Q6S5L8 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SHC4Q6S5L8 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHC4Q6S5L8 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SHC4Q6S5L8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SHC4Q6S5L8 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
SHC4Q6S5L8 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.36■□□□□ 0.69
SHC4Q6S5L8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.36■□□□□ 0.69
SHC4Q6S5L8 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.36■□□□□ 0.69
SHC4Q6S5L8 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.36■□□□□ 0.69
SHC4Q6S5L8 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.36■□□□□ 0.69
SHC4Q6S5L8 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.36■□□□□ 0.69
SHC4Q6S5L8 AC018695.7-201ENST00000624587 2492 ntBASIC19.36■□□□□ 0.69
SHC4Q6S5L8 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHC4Q6S5L8 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SHC4Q6S5L8 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.36■□□□□ 0.69
SHC4Q6S5L8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.36■□□□□ 0.69
SHC4Q6S5L8 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SHC4Q6S5L8 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHC4Q6S5L8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SHC4Q6S5L8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SHC4Q6S5L8 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHC4Q6S5L8 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.35■□□□□ 0.69
SHC4Q6S5L8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
SHC4Q6S5L8 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SHC4Q6S5L8 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHC4Q6S5L8 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHC4Q6S5L8 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHC4Q6S5L8 AP002414.1-201ENST00000391405 1147 ntBASIC19.35■□□□□ 0.69
SHC4Q6S5L8 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SHC4Q6S5L8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
SHC4Q6S5L8 KRT16P4-201ENST00000453883 522 ntBASIC19.35■□□□□ 0.69
SHC4Q6S5L8 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.35■□□□□ 0.69
SHC4Q6S5L8 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.35■□□□□ 0.69
SHC4Q6S5L8 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.35■□□□□ 0.69
SHC4Q6S5L8 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SHC4Q6S5L8 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.35■□□□□ 0.69
SHC4Q6S5L8 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SHC4Q6S5L8 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SHC4Q6S5L8 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SHC4Q6S5L8 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHC4Q6S5L8 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHC4Q6S5L8 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SHC4Q6S5L8 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SHC4Q6S5L8 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SHC4Q6S5L8 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms