Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXR1Q6PIV2 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXR1Q6PIV2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
FOXR1Q6PIV2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXR1Q6PIV2 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.97■□□□□ 0.47
FOXR1Q6PIV2 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXR1Q6PIV2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXR1Q6PIV2 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.97■□□□□ 0.47
FOXR1Q6PIV2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXR1Q6PIV2 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.97■□□□□ 0.47
FOXR1Q6PIV2 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXR1Q6PIV2 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXR1Q6PIV2 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXR1Q6PIV2 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.97■□□□□ 0.47
FOXR1Q6PIV2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.97■□□□□ 0.47
FOXR1Q6PIV2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.97■□□□□ 0.47
FOXR1Q6PIV2 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXR1Q6PIV2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXR1Q6PIV2 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
FOXR1Q6PIV2 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXR1Q6PIV2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
FOXR1Q6PIV2 AL023284.2-201ENST00000405850 579 ntBASIC17.97■□□□□ 0.47
FOXR1Q6PIV2 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.97■□□□□ 0.47
FOXR1Q6PIV2 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.97■□□□□ 0.47
FOXR1Q6PIV2 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXR1Q6PIV2 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
FOXR1Q6PIV2 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.97■□□□□ 0.47
FOXR1Q6PIV2 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
FOXR1Q6PIV2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXR1Q6PIV2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
FOXR1Q6PIV2 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.97■□□□□ 0.47
FOXR1Q6PIV2 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
FOXR1Q6PIV2 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXR1Q6PIV2 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
FOXR1Q6PIV2 AC092384.3-202ENST00000564646 2873 ntBASIC17.97■□□□□ 0.47
FOXR1Q6PIV2 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
FOXR1Q6PIV2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
FOXR1Q6PIV2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXR1Q6PIV2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXR1Q6PIV2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.96■□□□□ 0.47
FOXR1Q6PIV2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.96■□□□□ 0.47
FOXR1Q6PIV2 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXR1Q6PIV2 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXR1Q6PIV2 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXR1Q6PIV2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.96■□□□□ 0.47
FOXR1Q6PIV2 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXR1Q6PIV2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.96■□□□□ 0.47
FOXR1Q6PIV2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.96■□□□□ 0.47
FOXR1Q6PIV2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
FOXR1Q6PIV2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXR1Q6PIV2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXR1Q6PIV2 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.96■□□□□ 0.47
FOXR1Q6PIV2 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.96■□□□□ 0.47
FOXR1Q6PIV2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
FOXR1Q6PIV2 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.96■□□□□ 0.47
FOXR1Q6PIV2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
FOXR1Q6PIV2 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
FOXR1Q6PIV2 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.96■□□□□ 0.47
FOXR1Q6PIV2 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXR1Q6PIV2 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.96■□□□□ 0.47
FOXR1Q6PIV2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
FOXR1Q6PIV2 AC104640.1-201ENST00000562617 2109 ntBASIC17.96■□□□□ 0.47
FOXR1Q6PIV2 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
FOXR1Q6PIV2 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.96■□□□□ 0.47
FOXR1Q6PIV2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
FOXR1Q6PIV2 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.96■□□□□ 0.47
FOXR1Q6PIV2 KRT18P1-202ENST00000452408 1331 ntBASIC17.96■□□□□ 0.46
FOXR1Q6PIV2 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.96■□□□□ 0.46
FOXR1Q6PIV2 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
FOXR1Q6PIV2 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 MIR3180-5-201ENST00000583743 153 ntBASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.95■□□□□ 0.46
FOXR1Q6PIV2 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms