Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNKSR3Q6P9H4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNKSR3Q6P9H4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CNKSR3Q6P9H4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.31■□□□□ 0.52
CNKSR3Q6P9H4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNKSR3Q6P9H4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.31■□□□□ 0.52
CNKSR3Q6P9H4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CNKSR3Q6P9H4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNKSR3Q6P9H4 PIN1P1-201ENST00000412108 996 ntBASIC18.31■□□□□ 0.52
CNKSR3Q6P9H4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.31■□□□□ 0.52
CNKSR3Q6P9H4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.31■□□□□ 0.52
CNKSR3Q6P9H4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.31■□□□□ 0.52
CNKSR3Q6P9H4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNKSR3Q6P9H4 AC027369.6-201ENST00000525520 931 ntBASIC18.31■□□□□ 0.52
CNKSR3Q6P9H4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.31■□□□□ 0.52
CNKSR3Q6P9H4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.31■□□□□ 0.52
CNKSR3Q6P9H4 SPDYE22P-201ENST00000582158 798 ntBASIC18.31■□□□□ 0.52
CNKSR3Q6P9H4 AC025048.6-201ENST00000634326 1161 ntBASIC18.31■□□□□ 0.52
CNKSR3Q6P9H4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNKSR3Q6P9H4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNKSR3Q6P9H4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNKSR3Q6P9H4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNKSR3Q6P9H4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.31■□□□□ 0.52
CNKSR3Q6P9H4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.31■□□□□ 0.52
CNKSR3Q6P9H4 AC100757.3-201ENST00000622361 1406 ntBASIC18.31■□□□□ 0.52
CNKSR3Q6P9H4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.31■□□□□ 0.52
CNKSR3Q6P9H4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNKSR3Q6P9H4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNKSR3Q6P9H4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
CNKSR3Q6P9H4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNKSR3Q6P9H4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.3■□□□□ 0.52
CNKSR3Q6P9H4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.3■□□□□ 0.52
CNKSR3Q6P9H4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CNKSR3Q6P9H4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.3■□□□□ 0.52
CNKSR3Q6P9H4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNKSR3Q6P9H4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNKSR3Q6P9H4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.3■□□□□ 0.52
CNKSR3Q6P9H4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNKSR3Q6P9H4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNKSR3Q6P9H4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.3■□□□□ 0.52
CNKSR3Q6P9H4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNKSR3Q6P9H4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.3■□□□□ 0.52
CNKSR3Q6P9H4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.3■□□□□ 0.52
CNKSR3Q6P9H4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.3■□□□□ 0.52
CNKSR3Q6P9H4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.3■□□□□ 0.52
CNKSR3Q6P9H4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNKSR3Q6P9H4 AL590560.3-201ENST00000623350 461 ntBASIC18.3■□□□□ 0.52
CNKSR3Q6P9H4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.3■□□□□ 0.52
CNKSR3Q6P9H4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CNKSR3Q6P9H4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CNKSR3Q6P9H4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
CNKSR3Q6P9H4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNKSR3Q6P9H4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNKSR3Q6P9H4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CNKSR3Q6P9H4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.3■□□□□ 0.52
CNKSR3Q6P9H4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CNKSR3Q6P9H4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNKSR3Q6P9H4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNKSR3Q6P9H4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CNKSR3Q6P9H4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.29■□□□□ 0.52
CNKSR3Q6P9H4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNKSR3Q6P9H4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.29■□□□□ 0.52
CNKSR3Q6P9H4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CNKSR3Q6P9H4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.29■□□□□ 0.52
CNKSR3Q6P9H4 TNXA-203ENST00000507684 2038 ntBASIC18.29■□□□□ 0.52
CNKSR3Q6P9H4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.29■□□□□ 0.52
CNKSR3Q6P9H4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNKSR3Q6P9H4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.29■□□□□ 0.52
CNKSR3Q6P9H4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.29■□□□□ 0.52
CNKSR3Q6P9H4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNKSR3Q6P9H4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.29■□□□□ 0.52
CNKSR3Q6P9H4 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.29■□□□□ 0.52
CNKSR3Q6P9H4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CNKSR3Q6P9H4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.29■□□□□ 0.52
CNKSR3Q6P9H4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.29■□□□□ 0.52
CNKSR3Q6P9H4 AC018529.1-201ENST00000613063 361 ntBASIC18.29■□□□□ 0.52
CNKSR3Q6P9H4 AL662799.1-202ENST00000614205 422 ntBASIC18.29■□□□□ 0.52
CNKSR3Q6P9H4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNKSR3Q6P9H4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNKSR3Q6P9H4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNKSR3Q6P9H4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNKSR3Q6P9H4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CNKSR3Q6P9H4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNKSR3Q6P9H4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
CNKSR3Q6P9H4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNKSR3Q6P9H4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNKSR3Q6P9H4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNKSR3Q6P9H4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.29■□□□□ 0.52
CNKSR3Q6P9H4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms