Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 AC074386.1-202ENST00000463561 864 ntBASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 AC107918.2-201ENST00000530817 355 ntBASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 AC005829.1-201ENST00000570002 483 ntBASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 AL691403.2-201ENST00000618460 490 ntBASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SWSAP1Q6NVH7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.06■□□□□ 0.64
SWSAP1Q6NVH7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.05■□□□□ 0.64
SWSAP1Q6NVH7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SWSAP1Q6NVH7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SWSAP1Q6NVH7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SWSAP1Q6NVH7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SWSAP1Q6NVH7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SWSAP1Q6NVH7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SWSAP1Q6NVH7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SWSAP1Q6NVH7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SWSAP1Q6NVH7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SWSAP1Q6NVH7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.05■□□□□ 0.64
SWSAP1Q6NVH7 ALG1L5P-201ENST00000482043 771 ntBASIC19.05■□□□□ 0.64
SWSAP1Q6NVH7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.05■□□□□ 0.64
SWSAP1Q6NVH7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.05■□□□□ 0.64
SWSAP1Q6NVH7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.05■□□□□ 0.64
SWSAP1Q6NVH7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.05■□□□□ 0.64
SWSAP1Q6NVH7 REXO1L3P-201ENST00000622202 1288 ntBASIC19.05■□□□□ 0.64
SWSAP1Q6NVH7 C20orf181-201ENST00000623918 480 ntBASIC19.05■□□□□ 0.64
SWSAP1Q6NVH7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SWSAP1Q6NVH7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SWSAP1Q6NVH7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SWSAP1Q6NVH7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SWSAP1Q6NVH7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.05■□□□□ 0.64
SWSAP1Q6NVH7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SWSAP1Q6NVH7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SWSAP1Q6NVH7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SWSAP1Q6NVH7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
SWSAP1Q6NVH7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.05■□□□□ 0.64
SWSAP1Q6NVH7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SWSAP1Q6NVH7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SWSAP1Q6NVH7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.04■□□□□ 0.64
SWSAP1Q6NVH7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SWSAP1Q6NVH7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SWSAP1Q6NVH7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.04■□□□□ 0.64
SWSAP1Q6NVH7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SWSAP1Q6NVH7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SWSAP1Q6NVH7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.04■□□□□ 0.64
SWSAP1Q6NVH7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SWSAP1Q6NVH7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms