Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HERC4Q5GLZ8 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.23■□□□□ 0.67
HERC4Q5GLZ8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.23■□□□□ 0.67
HERC4Q5GLZ8 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.23■□□□□ 0.67
HERC4Q5GLZ8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.23■□□□□ 0.67
HERC4Q5GLZ8 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 AC004817.3-201ENST00000602957 2129 ntBASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 AC079776.2-201ENST00000641154 1609 ntBASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 AL049840.3-201ENST00000602669 611 ntBASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 SIGLEC16-201ENST00000599858 1437 ntBASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HERC4Q5GLZ8 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 SLC25A1P3-201ENST00000395415 828 ntBASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 MTDHP3-201ENST00000594186 672 ntBASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 AC073592.4-201ENST00000623827 446 ntBASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 AC079781.4-201ENST00000641908 219 ntBASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HERC4Q5GLZ8 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.66
HERC4Q5GLZ8 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms