Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 REXO1L6P-202ENST00000619970 1078 ntBASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 LINC00554-201ENST00000564841 3011 ntBASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 AL049757.1-201ENST00000616842 1596 ntBASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 AL513477.1-201ENST00000602865 2407 ntBASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
KHDC1Q4VXA5 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
KHDC1Q4VXA5 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KHDC1Q4VXA5 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.44■□□□□ 0.38
KHDC1Q4VXA5 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.44■□□□□ 0.38
KHDC1Q4VXA5 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
KHDC1Q4VXA5 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
KHDC1Q4VXA5 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KHDC1Q4VXA5 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.44■□□□□ 0.38
KHDC1Q4VXA5 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.44■□□□□ 0.38
KHDC1Q4VXA5 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.44■□□□□ 0.38
KHDC1Q4VXA5 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.44■□□□□ 0.38
KHDC1Q4VXA5 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
KHDC1Q4VXA5 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KHDC1Q4VXA5 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
KHDC1Q4VXA5 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KHDC1Q4VXA5 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
KHDC1Q4VXA5 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.44■□□□□ 0.38
KHDC1Q4VXA5 AF238378.1-201ENST00000526806 358 ntBASIC17.44■□□□□ 0.38
KHDC1Q4VXA5 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.44■□□□□ 0.38
KHDC1Q4VXA5 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.44■□□□□ 0.38
KHDC1Q4VXA5 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KHDC1Q4VXA5 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
KHDC1Q4VXA5 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KHDC1Q4VXA5 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
KHDC1Q4VXA5 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KHDC1Q4VXA5 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
KHDC1Q4VXA5 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KHDC1Q4VXA5 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 KRT8P10-201ENST00000450021 1447 ntBASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
KHDC1Q4VXA5 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 LINC00304-203ENST00000565008 1864 ntBASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms