Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 AL353732.1-201ENST00000569618 1459 ntBASIC18.62■□□□□ 0.57
TRIM71Q2Q1W2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
TRIM71Q2Q1W2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM71Q2Q1W2 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM71Q2Q1W2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM71Q2Q1W2 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
TRIM71Q2Q1W2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM71Q2Q1W2 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TRIM71Q2Q1W2 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
TRIM71Q2Q1W2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM71Q2Q1W2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
TRIM71Q2Q1W2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM71Q2Q1W2 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM71Q2Q1W2 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM71Q2Q1W2 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM71Q2Q1W2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM71Q2Q1W2 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM71Q2Q1W2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.61■□□□□ 0.57
TRIM71Q2Q1W2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM71Q2Q1W2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.61■□□□□ 0.57
TRIM71Q2Q1W2 AC008677.1-201ENST00000519230 1561 ntBASIC18.61■□□□□ 0.57
TRIM71Q2Q1W2 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM71Q2Q1W2 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TRIM71Q2Q1W2 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TRIM71Q2Q1W2 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM71Q2Q1W2 MIR943-201ENST00000401286 94 ntBASIC18.61■□□□□ 0.57
TRIM71Q2Q1W2 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.61■□□□□ 0.57
TRIM71Q2Q1W2 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.61■□□□□ 0.57
TRIM71Q2Q1W2 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TRIM71Q2Q1W2 AC239800.4-201ENST00000603712 296 ntBASIC18.61■□□□□ 0.57
TRIM71Q2Q1W2 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM71Q2Q1W2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
TRIM71Q2Q1W2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TRIM71Q2Q1W2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM71Q2Q1W2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM71Q2Q1W2 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM71Q2Q1W2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM71Q2Q1W2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TRIM71Q2Q1W2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 SLC22A20-204ENST00000530038 1673 ntBASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 AC087289.5-201ENST00000586076 3175 ntBASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 AL355312.1-201ENST00000407115 2176 ntBASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 UGT1A2P-201ENST00000454886 866 ntBASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 INGX-202ENST00000489074 768 ntBASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 AC133963.1-201ENST00000504166 1679 ntBASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM71Q2Q1W2 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM71Q2Q1W2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM71Q2Q1W2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM71Q2Q1W2 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TRIM71Q2Q1W2 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM71Q2Q1W2 AC026471.1-201ENST00000564629 3026 ntBASIC18.59■□□□□ 0.57
TRIM71Q2Q1W2 FO538757.1-201ENST00000623083 1397 ntBASIC18.59■□□□□ 0.57
TRIM71Q2Q1W2 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM71Q2Q1W2 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM71Q2Q1W2 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TRIM71Q2Q1W2 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM71Q2Q1W2 SLC25A1P3-201ENST00000395415 828 ntBASIC18.59■□□□□ 0.57
TRIM71Q2Q1W2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM71Q2Q1W2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.59■□□□□ 0.57
TRIM71Q2Q1W2 AC107890.1-201ENST00000422478 521 ntBASIC18.59■□□□□ 0.57
TRIM71Q2Q1W2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms