Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.45■□□□□ 0.86
PDS5AQ29RF7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDS5AQ29RF7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDS5AQ29RF7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDS5AQ29RF7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PDS5AQ29RF7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDS5AQ29RF7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.45■□□□□ 0.86
PDS5AQ29RF7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.45■□□□□ 0.86
PDS5AQ29RF7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PDS5AQ29RF7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.45■□□□□ 0.86
PDS5AQ29RF7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDS5AQ29RF7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDS5AQ29RF7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDS5AQ29RF7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDS5AQ29RF7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PDS5AQ29RF7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDS5AQ29RF7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDS5AQ29RF7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
PDS5AQ29RF7 GATB-205ENST00000508611 605 ntTSL 2 BASIC20.45■□□□□ 0.86
PDS5AQ29RF7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC20.45■□□□□ 0.86
PDS5AQ29RF7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PDS5AQ29RF7 RARRES2P8-201ENST00000566335 367 ntBASIC20.45■□□□□ 0.86
PDS5AQ29RF7 CD7-202ENST00000578509 925 ntTSL 3 BASIC20.45■□□□□ 0.86
PDS5AQ29RF7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDS5AQ29RF7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.45■□□□□ 0.86
PDS5AQ29RF7 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDS5AQ29RF7 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDS5AQ29RF7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
PDS5AQ29RF7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC20.44■□□□□ 0.86
PDS5AQ29RF7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PDS5AQ29RF7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDS5AQ29RF7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.44■□□□□ 0.86
PDS5AQ29RF7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDS5AQ29RF7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDS5AQ29RF7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDS5AQ29RF7 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDS5AQ29RF7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDS5AQ29RF7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.44■□□□□ 0.86
PDS5AQ29RF7 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
PDS5AQ29RF7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDS5AQ29RF7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC20.44■□□□□ 0.86
PDS5AQ29RF7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDS5AQ29RF7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDS5AQ29RF7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PDS5AQ29RF7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDS5AQ29RF7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDS5AQ29RF7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDS5AQ29RF7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PDS5AQ29RF7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDS5AQ29RF7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.44■□□□□ 0.86
PDS5AQ29RF7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDS5AQ29RF7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDS5AQ29RF7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDS5AQ29RF7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
PDS5AQ29RF7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDS5AQ29RF7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC20.43■□□□□ 0.86
PDS5AQ29RF7 AC092474.2-201ENST00000424288 719 ntBASIC20.43■□□□□ 0.86
PDS5AQ29RF7 AL671277.1-201ENST00000429656 993 ntBASIC20.43■□□□□ 0.86
PDS5AQ29RF7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC20.43■□□□□ 0.86
PDS5AQ29RF7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.43■□□□□ 0.86
PDS5AQ29RF7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PDS5AQ29RF7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PDS5AQ29RF7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDS5AQ29RF7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PDS5AQ29RF7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDS5AQ29RF7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDS5AQ29RF7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PDS5AQ29RF7 LINC00896-202ENST00000609602 2128 ntBASIC20.43■□□□□ 0.86
PDS5AQ29RF7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PDS5AQ29RF7 AC131009.4-201ENST00000624048 1740 ntBASIC20.43■□□□□ 0.86
PDS5AQ29RF7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.43■□□□□ 0.86
PDS5AQ29RF7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDS5AQ29RF7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
PDS5AQ29RF7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
PDS5AQ29RF7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDS5AQ29RF7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDS5AQ29RF7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDS5AQ29RF7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PDS5AQ29RF7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PDS5AQ29RF7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PDS5AQ29RF7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.42■□□□□ 0.86
PDS5AQ29RF7 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDS5AQ29RF7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDS5AQ29RF7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC20.42■□□□□ 0.86
PDS5AQ29RF7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDS5AQ29RF7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC20.42■□□□□ 0.86
PDS5AQ29RF7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PDS5AQ29RF7 PMS2P4-201ENST00000412466 1052 ntBASIC20.42■□□□□ 0.86
PDS5AQ29RF7 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PDS5AQ29RF7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.42■□□□□ 0.86
PDS5AQ29RF7 KRT8P48-201ENST00000515599 1220 ntBASIC20.42■□□□□ 0.86
PDS5AQ29RF7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC20.42■□□□□ 0.86
PDS5AQ29RF7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDS5AQ29RF7 AL031055.1-201ENST00000606362 631 ntBASIC20.42■□□□□ 0.86
PDS5AQ29RF7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC20.42■□□□□ 0.86
PDS5AQ29RF7 AP001350.2-201ENST00000625104 1094 ntBASIC20.42■□□□□ 0.86
PDS5AQ29RF7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PDS5AQ29RF7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PDS5AQ29RF7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
PDS5AQ29RF7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms