Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ABCA4P78363 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.75□□□□□ -0.05
ABCA4P78363 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
ABCA4P78363 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
ABCA4P78363 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.75□□□□□ -0.05
ABCA4P78363 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
ABCA4P78363 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCA4P78363 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.75□□□□□ -0.05
ABCA4P78363 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
ABCA4P78363 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.75□□□□□ -0.05
ABCA4P78363 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.75□□□□□ -0.05
ABCA4P78363 AL592309.1-201ENST00000443127 649 ntBASIC14.75□□□□□ -0.05
ABCA4P78363 CXCL1P1-201ENST00000502804 216 ntBASIC14.75□□□□□ -0.05
ABCA4P78363 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCA4P78363 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ABCA4P78363 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCA4P78363 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCA4P78363 AC046185.3-201ENST00000623228 1824 ntBASIC14.75□□□□□ -0.05
ABCA4P78363 MCC-208ENST00000514701 2855 ntTSL 2 BASIC14.75□□□□□ -0.05
ABCA4P78363 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.75□□□□□ -0.05
ABCA4P78363 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCA4P78363 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.75□□□□□ -0.05
ABCA4P78363 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ABCA4P78363 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCA4P78363 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
ABCA4P78363 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.75□□□□□ -0.05
ABCA4P78363 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ABCA4P78363 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCA4P78363 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
ABCA4P78363 TFAMP1-201ENST00000412727 736 ntBASIC14.75□□□□□ -0.05
ABCA4P78363 TSPY16P-201ENST00000449843 468 ntBASIC14.75□□□□□ -0.05
ABCA4P78363 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCA4P78363 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.75□□□□□ -0.05
ABCA4P78363 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.75□□□□□ -0.05
ABCA4P78363 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.75□□□□□ -0.05
ABCA4P78363 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCA4P78363 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.75□□□□□ -0.05
ABCA4P78363 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ABCA4P78363 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
ABCA4P78363 AC018470.1-201ENST00000624790 3129 ntBASIC14.74□□□□□ -0.05
ABCA4P78363 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ABCA4P78363 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
ABCA4P78363 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.74□□□□□ -0.05
ABCA4P78363 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ABCA4P78363 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCA4P78363 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCA4P78363 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCA4P78363 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
ABCA4P78363 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCA4P78363 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.74□□□□□ -0.05
ABCA4P78363 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
ABCA4P78363 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
ABCA4P78363 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.74□□□□□ -0.05
ABCA4P78363 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
ABCA4P78363 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
ABCA4P78363 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.74□□□□□ -0.05
ABCA4P78363 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.74□□□□□ -0.05
ABCA4P78363 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.74□□□□□ -0.05
ABCA4P78363 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCA4P78363 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.74□□□□□ -0.05
ABCA4P78363 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC14.74□□□□□ -0.05
ABCA4P78363 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCA4P78363 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.74□□□□□ -0.05
ABCA4P78363 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCA4P78363 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCA4P78363 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
ABCA4P78363 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA4P78363 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.73□□□□□ -0.05
ABCA4P78363 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
ABCA4P78363 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA4P78363 AC002558.1-201ENST00000488906 803 ntBASIC14.73□□□□□ -0.05
ABCA4P78363 AC112191.1-201ENST00000523689 701 ntBASIC14.73□□□□□ -0.05
ABCA4P78363 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA4P78363 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
ABCA4P78363 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
ABCA4P78363 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA4P78363 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
ABCA4P78363 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA4P78363 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.73□□□□□ -0.05
ABCA4P78363 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA4P78363 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.73□□□□□ -0.05
ABCA4P78363 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
ABCA4P78363 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC14.73□□□□□ -0.05
ABCA4P78363 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA4P78363 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA4P78363 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA4P78363 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
ABCA4P78363 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
ABCA4P78363 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA4P78363 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.73□□□□□ -0.05
ABCA4P78363 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.73□□□□□ -0.05
ABCA4P78363 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA4P78363 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.73□□□□□ -0.05
ABCA4P78363 AC009093.7-201ENST00000623853 1223 ntBASIC14.73□□□□□ -0.05
ABCA4P78363 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA4P78363 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA4P78363 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA4P78363 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
ABCA4P78363 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCA4P78363 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms