Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 MIR346-201ENST00000362234 95 ntBASIC17.95■□□□□ 0.46
ERVFC1P60507 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.95■□□□□ 0.46
ERVFC1P60507 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.95■□□□□ 0.46
ERVFC1P60507 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.95■□□□□ 0.46
ERVFC1P60507 AC027307.2-201ENST00000591252 911 ntBASIC17.95■□□□□ 0.46
ERVFC1P60507 AC008267.7-201ENST00000624570 1194 ntBASIC17.95■□□□□ 0.46
ERVFC1P60507 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
ERVFC1P60507 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ERVFC1P60507 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ERVFC1P60507 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.95■□□□□ 0.46
ERVFC1P60507 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
ERVFC1P60507 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ERVFC1P60507 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.95■□□□□ 0.46
ERVFC1P60507 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERVFC1P60507 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERVFC1P60507 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ERVFC1P60507 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.95■□□□□ 0.46
ERVFC1P60507 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
ERVFC1P60507 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ERVFC1P60507 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.95■□□□□ 0.46
ERVFC1P60507 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERVFC1P60507 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERVFC1P60507 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERVFC1P60507 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
ERVFC1P60507 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERVFC1P60507 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.94■□□□□ 0.46
ERVFC1P60507 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
ERVFC1P60507 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ERVFC1P60507 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERVFC1P60507 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERVFC1P60507 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERVFC1P60507 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERVFC1P60507 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.94■□□□□ 0.46
ERVFC1P60507 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.94■□□□□ 0.46
ERVFC1P60507 HLA-J-202ENST00000469281 1241 ntBASIC17.94■□□□□ 0.46
ERVFC1P60507 AP005018.1-201ENST00000525475 301 ntBASIC17.94■□□□□ 0.46
ERVFC1P60507 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.94■□□□□ 0.46
ERVFC1P60507 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERVFC1P60507 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.94■□□□□ 0.46
ERVFC1P60507 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
ERVFC1P60507 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERVFC1P60507 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.94■□□□□ 0.46
ERVFC1P60507 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.94■□□□□ 0.46
ERVFC1P60507 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
ERVFC1P60507 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.94■□□□□ 0.46
ERVFC1P60507 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ERVFC1P60507 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
ERVFC1P60507 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.94■□□□□ 0.46
ERVFC1P60507 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERVFC1P60507 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ERVFC1P60507 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.94■□□□□ 0.46
ERVFC1P60507 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.94■□□□□ 0.46
ERVFC1P60507 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.94■□□□□ 0.46
ERVFC1P60507 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERVFC1P60507 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERVFC1P60507 AC012317.2-201ENST00000623305 2251 ntBASIC17.93■□□□□ 0.46
ERVFC1P60507 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERVFC1P60507 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERVFC1P60507 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ERVFC1P60507 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERVFC1P60507 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ERVFC1P60507 SLC22A20-204ENST00000530038 1673 ntBASIC17.93■□□□□ 0.46
ERVFC1P60507 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ERVFC1P60507 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERVFC1P60507 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERVFC1P60507 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERVFC1P60507 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
ERVFC1P60507 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.93■□□□□ 0.46
ERVFC1P60507 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ERVFC1P60507 GK-202ENST00000378941 458 ntTSL 3 BASIC17.93■□□□□ 0.46
ERVFC1P60507 RNU1-129P-201ENST00000384064 167 ntBASIC17.93■□□□□ 0.46
ERVFC1P60507 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.93■□□□□ 0.46
ERVFC1P60507 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.93■□□□□ 0.46
ERVFC1P60507 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.93■□□□□ 0.46
ERVFC1P60507 GAPDHP21-201ENST00000450301 1010 ntBASIC17.93■□□□□ 0.46
ERVFC1P60507 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ERVFC1P60507 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.93■□□□□ 0.46
ERVFC1P60507 U1.21-201ENST00000580816 167 ntBASIC17.93■□□□□ 0.46
ERVFC1P60507 MIR4453-201ENST00000584019 89 ntBASIC17.93■□□□□ 0.46
ERVFC1P60507 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.93■□□□□ 0.46
ERVFC1P60507 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.93■□□□□ 0.46
ERVFC1P60507 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.93■□□□□ 0.46
ERVFC1P60507 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.93■□□□□ 0.46
ERVFC1P60507 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERVFC1P60507 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERVFC1P60507 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.93■□□□□ 0.46
ERVFC1P60507 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
ERVFC1P60507 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
ERVFC1P60507 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERVFC1P60507 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.93■□□□□ 0.46
ERVFC1P60507 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ERVFC1P60507 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
ERVFC1P60507 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.92■□□□□ 0.46
ERVFC1P60507 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ERVFC1P60507 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
ERVFC1P60507 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ERVFC1P60507 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
ERVFC1P60507 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.92■□□□□ 0.46
ERVFC1P60507 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
ERVFC1P60507 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms