Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MCCD1P59942 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.32■□□□□ 0.52
MCCD1P59942 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
MCCD1P59942 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.32■□□□□ 0.52
MCCD1P59942 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
MCCD1P59942 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.32■□□□□ 0.52
MCCD1P59942 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.32■□□□□ 0.52
MCCD1P59942 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
MCCD1P59942 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.32■□□□□ 0.52
MCCD1P59942 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.32■□□□□ 0.52
MCCD1P59942 AC145285.3-201ENST00000564603 959 ntBASIC18.32■□□□□ 0.52
MCCD1P59942 AP001005.1-201ENST00000571755 1248 ntBASIC18.32■□□□□ 0.52
MCCD1P59942 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.32■□□□□ 0.52
MCCD1P59942 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
MCCD1P59942 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.32■□□□□ 0.52
MCCD1P59942 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MCCD1P59942 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.32■□□□□ 0.52
MCCD1P59942 AC005593.1-201ENST00000624894 515 ntBASIC18.32■□□□□ 0.52
MCCD1P59942 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MCCD1P59942 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MCCD1P59942 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
MCCD1P59942 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.32■□□□□ 0.52
MCCD1P59942 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
MCCD1P59942 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MCCD1P59942 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
MCCD1P59942 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
MCCD1P59942 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
MCCD1P59942 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
MCCD1P59942 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.31■□□□□ 0.52
MCCD1P59942 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MCCD1P59942 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
MCCD1P59942 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MCCD1P59942 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
MCCD1P59942 AC006538.1-201ENST00000567905 1585 ntBASIC18.31■□□□□ 0.52
MCCD1P59942 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
MCCD1P59942 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
MCCD1P59942 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
MCCD1P59942 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
MCCD1P59942 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.31■□□□□ 0.52
MCCD1P59942 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.31■□□□□ 0.52
MCCD1P59942 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MCCD1P59942 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.31■□□□□ 0.52
MCCD1P59942 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
MCCD1P59942 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MCCD1P59942 AC009947.1-201ENST00000444350 727 ntBASIC18.31■□□□□ 0.52
MCCD1P59942 AC108073.2-201ENST00000464002 357 ntBASIC18.31■□□□□ 0.52
MCCD1P59942 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.31■□□□□ 0.52
MCCD1P59942 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.31■□□□□ 0.52
MCCD1P59942 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.31■□□□□ 0.52
MCCD1P59942 AC004790.2-201ENST00000623588 572 ntBASIC18.31■□□□□ 0.52
MCCD1P59942 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MCCD1P59942 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
MCCD1P59942 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MCCD1P59942 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.31■□□□□ 0.52
MCCD1P59942 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
MCCD1P59942 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.31■□□□□ 0.52
MCCD1P59942 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MCCD1P59942 AL353732.1-201ENST00000569618 1459 ntBASIC18.31■□□□□ 0.52
MCCD1P59942 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MCCD1P59942 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MCCD1P59942 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MCCD1P59942 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MCCD1P59942 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.31■□□□□ 0.52
MCCD1P59942 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MCCD1P59942 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MCCD1P59942 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MCCD1P59942 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MCCD1P59942 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MCCD1P59942 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.3■□□□□ 0.52
MCCD1P59942 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.3■□□□□ 0.52
MCCD1P59942 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
MCCD1P59942 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MCCD1P59942 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
MCCD1P59942 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MCCD1P59942 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MCCD1P59942 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MCCD1P59942 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.3■□□□□ 0.52
MCCD1P59942 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.3■□□□□ 0.52
MCCD1P59942 AC098831.1-202ENST00000438821 336 ntBASIC18.3■□□□□ 0.52
MCCD1P59942 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.3■□□□□ 0.52
MCCD1P59942 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.3■□□□□ 0.52
MCCD1P59942 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.3■□□□□ 0.52
MCCD1P59942 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.3■□□□□ 0.52
MCCD1P59942 UNC93B6-202ENST00000528242 690 ntBASIC18.3■□□□□ 0.52
MCCD1P59942 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.3■□□□□ 0.52
MCCD1P59942 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.3■□□□□ 0.52
MCCD1P59942 AC005412.3-201ENST00000580309 715 ntBASIC18.3■□□□□ 0.52
MCCD1P59942 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.3■□□□□ 0.52
MCCD1P59942 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
MCCD1P59942 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
MCCD1P59942 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
MCCD1P59942 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
MCCD1P59942 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MCCD1P59942 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.3■□□□□ 0.52
MCCD1P59942 AL603756.1-201ENST00000606511 2163 ntBASIC18.3■□□□□ 0.52
MCCD1P59942 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MCCD1P59942 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MCCD1P59942 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
MCCD1P59942 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MCCD1P59942 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms