Protein–RNA interactions for Protein: P57768

SNX16, Sorting nexin-16, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX16P57768 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX16P57768 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.15■□□□□ 0.5
SNX16P57768 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX16P57768 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.15■□□□□ 0.5
SNX16P57768 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX16P57768 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX16P57768 AC020916.1-201ENST00000587762 1774 ntBASIC18.15■□□□□ 0.5
SNX16P57768 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SNX16P57768 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX16P57768 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.15■□□□□ 0.5
SNX16P57768 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX16P57768 LAGE3P1-201ENST00000425356 484 ntBASIC18.15■□□□□ 0.5
SNX16P57768 TPM4P1-201ENST00000436100 807 ntBASIC18.15■□□□□ 0.5
SNX16P57768 EMBP1-201ENST00000458200 901 ntBASIC18.15■□□□□ 0.5
SNX16P57768 AF186996.4-201ENST00000467186 377 ntBASIC18.15■□□□□ 0.5
SNX16P57768 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.15■□□□□ 0.5
SNX16P57768 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SNX16P57768 AL353135.1-201ENST00000606729 504 ntBASIC18.15■□□□□ 0.5
SNX16P57768 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SNX16P57768 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SNX16P57768 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SNX16P57768 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX16P57768 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX16P57768 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX16P57768 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX16P57768 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.15■□□□□ 0.5
SNX16P57768 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.15■□□□□ 0.5
SNX16P57768 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.15■□□□□ 0.5
SNX16P57768 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.15■□□□□ 0.5
SNX16P57768 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX16P57768 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX16P57768 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
SNX16P57768 PKD1P5-201ENST00000532415 10291 ntBASIC18.14■□□□□ 0.5
SNX16P57768 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.14■□□□□ 0.5
SNX16P57768 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
SNX16P57768 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
SNX16P57768 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX16P57768 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.14■□□□□ 0.49
SNX16P57768 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.14■□□□□ 0.49
SNX16P57768 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.14■□□□□ 0.49
SNX16P57768 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX16P57768 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.14■□□□□ 0.49
SNX16P57768 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.14■□□□□ 0.49
SNX16P57768 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNX16P57768 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX16P57768 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.14■□□□□ 0.49
SNX16P57768 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNX16P57768 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.14■□□□□ 0.49
SNX16P57768 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.14■□□□□ 0.49
SNX16P57768 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.14■□□□□ 0.49
SNX16P57768 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNX16P57768 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNX16P57768 AL139424.1-201ENST00000607572 797 ntBASIC18.14■□□□□ 0.49
SNX16P57768 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX16P57768 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.14■□□□□ 0.49
SNX16P57768 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.14■□□□□ 0.49
SNX16P57768 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX16P57768 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX16P57768 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX16P57768 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.14■□□□□ 0.49
SNX16P57768 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.14■□□□□ 0.49
SNX16P57768 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX16P57768 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
SNX16P57768 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX16P57768 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX16P57768 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SNX16P57768 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX16P57768 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.13■□□□□ 0.49
SNX16P57768 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX16P57768 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX16P57768 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.13■□□□□ 0.49
SNX16P57768 SLC25A1P3-201ENST00000395415 828 ntBASIC18.13■□□□□ 0.49
SNX16P57768 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX16P57768 FAM197Y8-203ENST00000450145 560 ntBASIC18.13■□□□□ 0.49
SNX16P57768 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SNX16P57768 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX16P57768 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SNX16P57768 AC021087.4-201ENST00000563761 564 ntBASIC18.13■□□□□ 0.49
SNX16P57768 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.13■□□□□ 0.49
SNX16P57768 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNX16P57768 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.13■□□□□ 0.49
SNX16P57768 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.13■□□□□ 0.49
SNX16P57768 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
SNX16P57768 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.13■□□□□ 0.49
SNX16P57768 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SNX16P57768 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SNX16P57768 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.13■□□□□ 0.49
SNX16P57768 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SNX16P57768 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX16P57768 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX16P57768 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX16P57768 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNX16P57768 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX16P57768 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SNX16P57768 FZD10-202ENST00000539839 3282 ntBASIC18.13■□□□□ 0.49
SNX16P57768 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX16P57768 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SNX16P57768 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SNX16P57768 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX16P57768 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms