Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CLDN8P56748 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CLDN8P56748 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CLDN8P56748 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CLDN8P56748 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CLDN8P56748 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN8P56748 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.35■□□□□ 0.21
CLDN8P56748 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
CLDN8P56748 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN8P56748 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN8P56748 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN8P56748 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.35■□□□□ 0.21
CLDN8P56748 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
CLDN8P56748 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN8P56748 KRT17P6-201ENST00000453795 1220 ntBASIC16.35■□□□□ 0.21
CLDN8P56748 MINOS1P3-201ENST00000457048 203 ntBASIC16.35■□□□□ 0.21
CLDN8P56748 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.35■□□□□ 0.21
CLDN8P56748 TPSP2-201ENST00000561760 610 ntBASIC16.35■□□□□ 0.21
CLDN8P56748 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.35■□□□□ 0.21
CLDN8P56748 BNIP3P18-201ENST00000593976 575 ntBASIC16.35■□□□□ 0.21
CLDN8P56748 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.35■□□□□ 0.21
CLDN8P56748 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.35■□□□□ 0.21
CLDN8P56748 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN8P56748 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN8P56748 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN8P56748 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN8P56748 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN8P56748 AC092171.3-201ENST00000610122 2651 ntBASIC16.35■□□□□ 0.21
CLDN8P56748 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.35■□□□□ 0.21
CLDN8P56748 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.35■□□□□ 0.21
CLDN8P56748 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN8P56748 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN8P56748 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN8P56748 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.35■□□□□ 0.21
CLDN8P56748 PCDHB17P-201ENST00000539533 2393 ntBASIC16.35■□□□□ 0.21
CLDN8P56748 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.35■□□□□ 0.21
CLDN8P56748 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN8P56748 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN8P56748 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.35■□□□□ 0.21
CLDN8P56748 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
CLDN8P56748 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.35■□□□□ 0.21
CLDN8P56748 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN8P56748 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN8P56748 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN8P56748 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN8P56748 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CLDN8P56748 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN8P56748 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.34■□□□□ 0.21
CLDN8P56748 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN8P56748 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.34■□□□□ 0.21
CLDN8P56748 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
CLDN8P56748 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN8P56748 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN8P56748 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN8P56748 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CLDN8P56748 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN8P56748 RCN1P2-201ENST00000398357 915 ntBASIC16.34■□□□□ 0.21
CLDN8P56748 ACTG1P4-201ENST00000425123 1122 ntBASIC16.34■□□□□ 0.21
CLDN8P56748 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.34■□□□□ 0.21
CLDN8P56748 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN8P56748 AP002383.4-201ENST00000442518 975 ntBASIC16.34■□□□□ 0.21
CLDN8P56748 SIGLEC30P-201ENST00000455569 941 ntBASIC16.34■□□□□ 0.21
CLDN8P56748 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN8P56748 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.34■□□□□ 0.21
CLDN8P56748 AP002490.2-201ENST00000524791 560 ntBASIC16.34■□□□□ 0.21
CLDN8P56748 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN8P56748 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN8P56748 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CLDN8P56748 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CLDN8P56748 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.34■□□□□ 0.21
CLDN8P56748 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.34■□□□□ 0.21
CLDN8P56748 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.34■□□□□ 0.21
CLDN8P56748 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN8P56748 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
CLDN8P56748 TUBB8P12-201ENST00000308911 1335 ntBASIC16.34■□□□□ 0.21
CLDN8P56748 TUBB7P-202ENST00000428444 1305 ntBASIC16.34■□□□□ 0.21
CLDN8P56748 TUBB8P7-204ENST00000567960 1332 ntBASIC16.34■□□□□ 0.21
CLDN8P56748 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN8P56748 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN8P56748 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CLDN8P56748 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN8P56748 NSUN5P1-202ENST00000421140 1535 ntBASIC16.34■□□□□ 0.21
CLDN8P56748 NSUN5P2-203ENST00000457352 1529 ntBASIC16.34■□□□□ 0.21
CLDN8P56748 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CLDN8P56748 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.34■□□□□ 0.21
CLDN8P56748 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN8P56748 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN8P56748 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.34■□□□□ 0.21
CLDN8P56748 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN8P56748 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN8P56748 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
CLDN8P56748 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN8P56748 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN8P56748 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN8P56748 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CLDN8P56748 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN8P56748 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN8P56748 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CLDN8P56748 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN8P56748 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms