Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH13P55290 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH13P55290 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH13P55290 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH13P55290 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH13P55290 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.84■□□□□ 0.29
CDH13P55290 AC011467.2-201ENST00000598425 242 ntBASIC16.84■□□□□ 0.29
CDH13P55290 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH13P55290 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.84■□□□□ 0.29
CDH13P55290 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH13P55290 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
CDH13P55290 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH13P55290 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH13P55290 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH13P55290 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH13P55290 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH13P55290 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH13P55290 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH13P55290 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CDH13P55290 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH13P55290 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH13P55290 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH13P55290 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CDH13P55290 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDH13P55290 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDH13P55290 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDH13P55290 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH13P55290 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH13P55290 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH13P55290 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CDH13P55290 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH13P55290 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH13P55290 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH13P55290 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CDH13P55290 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH13P55290 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH13P55290 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
CDH13P55290 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH13P55290 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.83■□□□□ 0.28
CDH13P55290 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH13P55290 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH13P55290 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH13P55290 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH13P55290 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH13P55290 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH13P55290 KRT18P1-202ENST00000452408 1331 ntBASIC16.83■□□□□ 0.28
CDH13P55290 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CDH13P55290 VENTXP7-201ENST00000475503 772 ntBASIC16.83■□□□□ 0.28
CDH13P55290 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH13P55290 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH13P55290 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH13P55290 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH13P55290 AC124947.2-201ENST00000547118 1133 ntBASIC16.83■□□□□ 0.28
CDH13P55290 AL049597.2-201ENST00000565575 961 ntBASIC16.83■□□□□ 0.28
CDH13P55290 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.83■□□□□ 0.28
CDH13P55290 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CDH13P55290 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.83■□□□□ 0.28
CDH13P55290 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
CDH13P55290 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH13P55290 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH13P55290 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH13P55290 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH13P55290 TP73-AS1-210ENST00000637775 1455 ntBASIC16.83■□□□□ 0.28
CDH13P55290 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CDH13P55290 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH13P55290 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH13P55290 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH13P55290 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH13P55290 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH13P55290 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH13P55290 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH13P55290 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH13P55290 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDH13P55290 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CDH13P55290 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDH13P55290 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH13P55290 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH13P55290 AC233702.3-201ENST00000578656 1387 ntBASIC16.82■□□□□ 0.28
CDH13P55290 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH13P55290 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH13P55290 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH13P55290 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.82■□□□□ 0.28
CDH13P55290 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH13P55290 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH13P55290 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.82■□□□□ 0.28
CDH13P55290 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.82■□□□□ 0.28
CDH13P55290 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.82■□□□□ 0.28
CDH13P55290 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.82■□□□□ 0.28
CDH13P55290 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH13P55290 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.82■□□□□ 0.28
CDH13P55290 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH13P55290 AD001527.2-201ENST00000622994 785 ntBASIC16.82■□□□□ 0.28
CDH13P55290 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH13P55290 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDH13P55290 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDH13P55290 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CDH13P55290 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH13P55290 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH13P55290 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH13P55290 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms