Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH8P55286 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH8P55286 AC104109.2-201ENST00000602919 1418 ntBASIC18.32■□□□□ 0.52
CDH8P55286 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH8P55286 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.32■□□□□ 0.52
CDH8P55286 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.32■□□□□ 0.52
CDH8P55286 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH8P55286 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH8P55286 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH8P55286 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CDH8P55286 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH8P55286 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH8P55286 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH8P55286 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH8P55286 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.32■□□□□ 0.52
CDH8P55286 AC009947.1-201ENST00000444350 727 ntBASIC18.32■□□□□ 0.52
CDH8P55286 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH8P55286 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.32■□□□□ 0.52
CDH8P55286 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.32■□□□□ 0.52
CDH8P55286 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.32■□□□□ 0.52
CDH8P55286 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.32■□□□□ 0.52
CDH8P55286 PGM5P2-202ENST00000637225 1043 ntBASIC18.32■□□□□ 0.52
CDH8P55286 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH8P55286 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.32■□□□□ 0.52
CDH8P55286 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH8P55286 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH8P55286 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH8P55286 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH8P55286 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH8P55286 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH8P55286 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH8P55286 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.32■□□□□ 0.52
CDH8P55286 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH8P55286 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH8P55286 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH8P55286 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.32■□□□□ 0.52
CDH8P55286 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CDH8P55286 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH8P55286 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH8P55286 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH8P55286 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH8P55286 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH8P55286 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
CDH8P55286 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH8P55286 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH8P55286 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH8P55286 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH8P55286 PAWRP1-201ENST00000451083 565 ntBASIC18.31■□□□□ 0.52
CDH8P55286 AC108073.2-201ENST00000464002 357 ntBASIC18.31■□□□□ 0.52
CDH8P55286 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CDH8P55286 AC004790.2-201ENST00000623588 572 ntBASIC18.31■□□□□ 0.52
CDH8P55286 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH8P55286 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH8P55286 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH8P55286 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH8P55286 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CDH8P55286 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH8P55286 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH8P55286 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH8P55286 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH8P55286 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH8P55286 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.31■□□□□ 0.52
CDH8P55286 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CDH8P55286 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH8P55286 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH8P55286 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH8P55286 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
CDH8P55286 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH8P55286 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH8P55286 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH8P55286 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH8P55286 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH8P55286 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH8P55286 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH8P55286 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH8P55286 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH8P55286 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH8P55286 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH8P55286 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CDH8P55286 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH8P55286 AL022342.1-201ENST00000400363 863 ntBASIC18.3■□□□□ 0.52
CDH8P55286 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH8P55286 AC108751.1-201ENST00000490852 363 ntBASIC18.3■□□□□ 0.52
CDH8P55286 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH8P55286 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CDH8P55286 AC034105.1-201ENST00000563488 319 ntBASIC18.3■□□□□ 0.52
CDH8P55286 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.3■□□□□ 0.52
CDH8P55286 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH8P55286 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH8P55286 Z83851.2-201ENST00000609564 659 ntBASIC18.3■□□□□ 0.52
CDH8P55286 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CDH8P55286 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH8P55286 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH8P55286 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH8P55286 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH8P55286 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH8P55286 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH8P55286 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH8P55286 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH8P55286 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms