Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDX1P52945 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDX1P52945 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.71■□□□□ 0.27
PDX1P52945 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PDX1P52945 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.26
PDX1P52945 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.71■□□□□ 0.26
PDX1P52945 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
PDX1P52945 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PDX1P52945 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDX1P52945 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.7■□□□□ 0.26
PDX1P52945 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDX1P52945 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDX1P52945 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PDX1P52945 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDX1P52945 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDX1P52945 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.7■□□□□ 0.26
PDX1P52945 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PDX1P52945 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDX1P52945 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDX1P52945 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.7■□□□□ 0.26
PDX1P52945 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PDX1P52945 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PDX1P52945 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.7■□□□□ 0.26
PDX1P52945 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDX1P52945 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.7■□□□□ 0.26
PDX1P52945 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PDX1P52945 MRPL20P1-201ENST00000400819 433 ntBASIC16.7■□□□□ 0.26
PDX1P52945 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDX1P52945 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.7■□□□□ 0.26
PDX1P52945 AL031432.2-201ENST00000566714 459 ntBASIC16.7■□□□□ 0.26
PDX1P52945 AL928711.1-201ENST00000570165 459 ntBASIC16.7■□□□□ 0.26
PDX1P52945 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.7■□□□□ 0.26
PDX1P52945 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PDX1P52945 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDX1P52945 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDX1P52945 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.7■□□□□ 0.26
PDX1P52945 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PDX1P52945 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PDX1P52945 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDX1P52945 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.7■□□□□ 0.26
PDX1P52945 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.7■□□□□ 0.26
PDX1P52945 BX276092.7-203ENST00000637198 1536 ntBASIC16.7■□□□□ 0.26
PDX1P52945 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.7■□□□□ 0.26
PDX1P52945 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PDX1P52945 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
PDX1P52945 AC097637.2-201ENST00000624096 1997 ntBASIC16.69■□□□□ 0.26
PDX1P52945 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDX1P52945 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.69■□□□□ 0.26
PDX1P52945 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PDX1P52945 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PDX1P52945 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PDX1P52945 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDX1P52945 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDX1P52945 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDX1P52945 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.69■□□□□ 0.26
PDX1P52945 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
PDX1P52945 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDX1P52945 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PDX1P52945 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDX1P52945 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDX1P52945 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDX1P52945 AP002414.1-201ENST00000391405 1147 ntBASIC16.69■□□□□ 0.26
PDX1P52945 DDX43P3-201ENST00000441064 443 ntBASIC16.69■□□□□ 0.26
PDX1P52945 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.69■□□□□ 0.26
PDX1P52945 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PDX1P52945 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDX1P52945 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDX1P52945 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.69■□□□□ 0.26
PDX1P52945 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.69■□□□□ 0.26
PDX1P52945 KRT19P2-202ENST00000557173 1012 ntBASIC16.69■□□□□ 0.26
PDX1P52945 AC096734.2-201ENST00000562054 433 ntBASIC16.69■□□□□ 0.26
PDX1P52945 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.69■□□□□ 0.26
PDX1P52945 AC027612.4-201ENST00000605371 583 ntBASIC16.69■□□□□ 0.26
PDX1P52945 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
PDX1P52945 AC004877.2-201ENST00000623941 599 ntBASIC16.69■□□□□ 0.26
PDX1P52945 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDX1P52945 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDX1P52945 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PDX1P52945 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDX1P52945 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PDX1P52945 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDX1P52945 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PDX1P52945 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.69■□□□□ 0.26
PDX1P52945 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDX1P52945 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDX1P52945 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PDX1P52945 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.69■□□□□ 0.26
PDX1P52945 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PDX1P52945 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PDX1P52945 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDX1P52945 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.69■□□□□ 0.26
PDX1P52945 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PDX1P52945 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDX1P52945 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDX1P52945 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDX1P52945 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDX1P52945 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
PDX1P52945 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDX1P52945 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.68■□□□□ 0.26
PDX1P52945 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms