Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GRIA1P42261 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GRIA1P42261 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
GRIA1P42261 PCDHB17P-201ENST00000539533 2393 ntBASIC17.43■□□□□ 0.38
GRIA1P42261 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GRIA1P42261 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GRIA1P42261 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GRIA1P42261 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GRIA1P42261 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.43■□□□□ 0.38
GRIA1P42261 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
GRIA1P42261 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
GRIA1P42261 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GRIA1P42261 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GRIA1P42261 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GRIA1P42261 AL020989.1-201ENST00000422979 469 ntBASIC17.43■□□□□ 0.38
GRIA1P42261 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
GRIA1P42261 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
GRIA1P42261 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.43■□□□□ 0.38
GRIA1P42261 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GRIA1P42261 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
GRIA1P42261 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.43■□□□□ 0.38
GRIA1P42261 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.43■□□□□ 0.38
GRIA1P42261 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.43■□□□□ 0.38
GRIA1P42261 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.43■□□□□ 0.38
GRIA1P42261 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GRIA1P42261 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.43■□□□□ 0.38
GRIA1P42261 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GRIA1P42261 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GRIA1P42261 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GRIA1P42261 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
GRIA1P42261 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GRIA1P42261 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
GRIA1P42261 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA1P42261 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA1P42261 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.42■□□□□ 0.38
GRIA1P42261 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA1P42261 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
GRIA1P42261 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
GRIA1P42261 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
GRIA1P42261 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA1P42261 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA1P42261 SIGLEC30P-201ENST00000455569 941 ntBASIC17.42■□□□□ 0.38
GRIA1P42261 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.42■□□□□ 0.38
GRIA1P42261 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.42■□□□□ 0.38
GRIA1P42261 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA1P42261 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.42■□□□□ 0.38
GRIA1P42261 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.42■□□□□ 0.38
GRIA1P42261 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.42■□□□□ 0.38
GRIA1P42261 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
GRIA1P42261 AP001269.4-201ENST00000609611 512 ntBASIC17.42■□□□□ 0.38
GRIA1P42261 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
GRIA1P42261 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
GRIA1P42261 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA1P42261 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
GRIA1P42261 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA1P42261 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA1P42261 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA1P42261 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA1P42261 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA1P42261 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GRIA1P42261 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
GRIA1P42261 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GRIA1P42261 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
GRIA1P42261 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
GRIA1P42261 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.41■□□□□ 0.38
GRIA1P42261 AC097637.2-201ENST00000624096 1997 ntBASIC17.41■□□□□ 0.38
GRIA1P42261 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GRIA1P42261 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
GRIA1P42261 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GRIA1P42261 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GRIA1P42261 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.41■□□□□ 0.38
GRIA1P42261 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.41■□□□□ 0.38
GRIA1P42261 AC132008.2-207ENST00000454517 770 ntBASIC17.41■□□□□ 0.38
GRIA1P42261 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GRIA1P42261 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.41■□□□□ 0.38
GRIA1P42261 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.41■□□□□ 0.38
GRIA1P42261 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GRIA1P42261 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.41■□□□□ 0.38
GRIA1P42261 AL591684.3-201ENST00000605187 298 ntBASIC17.41■□□□□ 0.38
GRIA1P42261 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GRIA1P42261 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GRIA1P42261 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.41■□□□□ 0.38
GRIA1P42261 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GRIA1P42261 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
GRIA1P42261 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.41■□□□□ 0.38
GRIA1P42261 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.41■□□□□ 0.38
GRIA1P42261 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.41■□□□□ 0.38
GRIA1P42261 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GRIA1P42261 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
GRIA1P42261 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GRIA1P42261 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
GRIA1P42261 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
GRIA1P42261 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GRIA1P42261 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
GRIA1P42261 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GRIA1P42261 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GRIA1P42261 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GRIA1P42261 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.4■□□□□ 0.38
GRIA1P42261 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GRIA1P42261 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms