Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRPHP41219 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
PRPHP41219 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.4■□□□□ 0.7
PRPHP41219 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRPHP41219 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.4■□□□□ 0.7
PRPHP41219 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.4■□□□□ 0.7
PRPHP41219 AL121912.1-201ENST00000603683 238 ntBASIC19.4■□□□□ 0.7
PRPHP41219 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRPHP41219 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRPHP41219 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.4■□□□□ 0.7
PRPHP41219 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRPHP41219 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.4■□□□□ 0.7
PRPHP41219 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRPHP41219 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PRPHP41219 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PRPHP41219 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRPHP41219 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.4■□□□□ 0.7
PRPHP41219 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.4■□□□□ 0.7
PRPHP41219 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRPHP41219 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRPHP41219 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRPHP41219 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRPHP41219 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRPHP41219 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.39■□□□□ 0.69
PRPHP41219 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRPHP41219 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.39■□□□□ 0.69
PRPHP41219 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRPHP41219 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.39■□□□□ 0.69
PRPHP41219 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.39■□□□□ 0.69
PRPHP41219 LAGE3P1-201ENST00000425356 484 ntBASIC19.39■□□□□ 0.69
PRPHP41219 AL450487.1-201ENST00000426799 995 ntBASIC19.39■□□□□ 0.69
PRPHP41219 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.39■□□□□ 0.69
PRPHP41219 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.39■□□□□ 0.69
PRPHP41219 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.39■□□□□ 0.69
PRPHP41219 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRPHP41219 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.39■□□□□ 0.69
PRPHP41219 DUX4L17-201ENST00000557360 1267 ntBASIC19.39■□□□□ 0.69
PRPHP41219 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PRPHP41219 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.39■□□□□ 0.69
PRPHP41219 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.39■□□□□ 0.69
PRPHP41219 AC107918.4-202ENST00000641623 219 ntBASIC19.39■□□□□ 0.69
PRPHP41219 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRPHP41219 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.39■□□□□ 0.69
PRPHP41219 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRPHP41219 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.39■□□□□ 0.69
PRPHP41219 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRPHP41219 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PRPHP41219 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.39■□□□□ 0.69
PRPHP41219 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.39■□□□□ 0.69
PRPHP41219 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRPHP41219 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRPHP41219 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRPHP41219 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.39■□□□□ 0.69
PRPHP41219 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRPHP41219 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRPHP41219 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRPHP41219 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRPHP41219 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.39■□□□□ 0.69
PRPHP41219 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRPHP41219 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRPHP41219 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRPHP41219 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRPHP41219 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRPHP41219 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRPHP41219 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRPHP41219 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.38■□□□□ 0.69
PRPHP41219 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRPHP41219 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.38■□□□□ 0.69
PRPHP41219 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRPHP41219 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRPHP41219 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRPHP41219 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.38■□□□□ 0.69
PRPHP41219 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PRPHP41219 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.38■□□□□ 0.69
PRPHP41219 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRPHP41219 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.38■□□□□ 0.69
PRPHP41219 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.38■□□□□ 0.69
PRPHP41219 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PRPHP41219 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.38■□□□□ 0.69
PRPHP41219 AC106820.2-201ENST00000563775 3264 ntBASIC19.38■□□□□ 0.69
PRPHP41219 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.38■□□□□ 0.69
PRPHP41219 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.38■□□□□ 0.69
PRPHP41219 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.38■□□□□ 0.69
PRPHP41219 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRPHP41219 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRPHP41219 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRPHP41219 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PRPHP41219 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRPHP41219 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRPHP41219 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.37■□□□□ 0.69
PRPHP41219 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRPHP41219 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PRPHP41219 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PRPHP41219 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRPHP41219 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRPHP41219 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRPHP41219 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.37■□□□□ 0.69
PRPHP41219 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.37■□□□□ 0.69
PRPHP41219 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRPHP41219 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms