Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.03■□□□□ -0
GDNFP39905 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
GDNFP39905 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.03■□□□□ -0
GDNFP39905 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.03■□□□□ -0
GDNFP39905 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.03■□□□□ -0
GDNFP39905 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GDNFP39905 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.03■□□□□ -0
GDNFP39905 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GDNFP39905 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
GDNFP39905 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GDNFP39905 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.03■□□□□ -0
GDNFP39905 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.03■□□□□ -0
GDNFP39905 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
GDNFP39905 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GDNFP39905 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.03■□□□□ -0
GDNFP39905 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GDNFP39905 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.03■□□□□ -0
GDNFP39905 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.03■□□□□ -0
GDNFP39905 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.02■□□□□ -0
GDNFP39905 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
GDNFP39905 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
GDNFP39905 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.02■□□□□ -0
GDNFP39905 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.02■□□□□ -0
GDNFP39905 AC105917.1-201ENST00000506637 2539 ntBASIC15.02■□□□□ -0
GDNFP39905 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.02■□□□□ -0
GDNFP39905 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GDNFP39905 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GDNFP39905 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GDNFP39905 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GDNFP39905 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.02■□□□□ -0
GDNFP39905 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.02■□□□□ -0
GDNFP39905 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
GDNFP39905 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.02■□□□□ -0
GDNFP39905 AC104076.2-201ENST00000448912 469 ntBASIC15.02■□□□□ -0
GDNFP39905 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.02■□□□□ -0
GDNFP39905 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.02■□□□□ -0
GDNFP39905 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.02■□□□□ -0
GDNFP39905 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
GDNFP39905 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
GDNFP39905 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.02■□□□□ -0
GDNFP39905 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.02■□□□□ -0
GDNFP39905 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.02■□□□□ -0
GDNFP39905 AC079602.3-201ENST00000623931 403 ntBASIC15.02■□□□□ -0
GDNFP39905 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.02□□□□□ -0.01
GDNFP39905 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
GDNFP39905 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GDNFP39905 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
GDNFP39905 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GDNFP39905 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.02□□□□□ -0.01
GDNFP39905 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
GDNFP39905 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GDNFP39905 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.02□□□□□ -0.01
GDNFP39905 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
GDNFP39905 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GDNFP39905 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
GDNFP39905 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
GDNFP39905 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GDNFP39905 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
GDNFP39905 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.02□□□□□ -0.01
GDNFP39905 AC092053.1-201ENST00000605787 1936 ntBASIC15.02□□□□□ -0.01
GDNFP39905 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.02□□□□□ -0.01
GDNFP39905 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
GDNFP39905 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.01□□□□□ -0.01
GDNFP39905 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
GDNFP39905 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.01□□□□□ -0.01
GDNFP39905 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GDNFP39905 LINC01311-201ENST00000565162 1445 ntBASIC15.01□□□□□ -0.01
GDNFP39905 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GDNFP39905 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
GDNFP39905 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.01□□□□□ -0.01
GDNFP39905 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
GDNFP39905 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
GDNFP39905 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.01□□□□□ -0.01
GDNFP39905 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GDNFP39905 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GDNFP39905 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
GDNFP39905 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
GDNFP39905 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GDNFP39905 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GDNFP39905 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.01□□□□□ -0.01
GDNFP39905 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
GDNFP39905 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
GDNFP39905 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GDNFP39905 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.01□□□□□ -0.01
GDNFP39905 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.01□□□□□ -0.01
GDNFP39905 KRT18P38-201ENST00000449496 1282 ntBASIC15.01□□□□□ -0.01
GDNFP39905 RASA4DP-201ENST00000460726 1199 ntBASIC15.01□□□□□ -0.01
GDNFP39905 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
GDNFP39905 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.01□□□□□ -0.01
GDNFP39905 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
GDNFP39905 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
GDNFP39905 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GDNFP39905 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GDNFP39905 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GDNFP39905 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
GDNFP39905 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
GDNFP39905 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GDNFP39905 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
GDNFP39905 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GDNFP39905 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms