Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RORAP35398 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RORAP35398 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RORAP35398 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RORAP35398 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
RORAP35398 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.34■□□□□ 0.21
RORAP35398 MCCD1P2-201ENST00000423228 335 ntBASIC16.34■□□□□ 0.21
RORAP35398 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.34■□□□□ 0.21
RORAP35398 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.34■□□□□ 0.21
RORAP35398 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.34■□□□□ 0.21
RORAP35398 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.34■□□□□ 0.21
RORAP35398 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.34■□□□□ 0.21
RORAP35398 OR7E47P-204ENST00000575924 449 ntBASIC16.34■□□□□ 0.21
RORAP35398 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.34■□□□□ 0.21
RORAP35398 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.34■□□□□ 0.21
RORAP35398 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RORAP35398 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RORAP35398 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RORAP35398 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RORAP35398 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RORAP35398 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RORAP35398 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RORAP35398 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RORAP35398 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.34■□□□□ 0.21
RORAP35398 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RORAP35398 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RORAP35398 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RORAP35398 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.34■□□□□ 0.21
RORAP35398 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RORAP35398 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RORAP35398 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RORAP35398 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RORAP35398 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.33■□□□□ 0.21
RORAP35398 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RORAP35398 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.33■□□□□ 0.21
RORAP35398 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.33■□□□□ 0.21
RORAP35398 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RORAP35398 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.33■□□□□ 0.2
RORAP35398 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RORAP35398 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RORAP35398 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.33■□□□□ 0.2
RORAP35398 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RORAP35398 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RORAP35398 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.33■□□□□ 0.2
RORAP35398 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.33■□□□□ 0.2
RORAP35398 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.33■□□□□ 0.2
RORAP35398 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RORAP35398 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.33■□□□□ 0.2
RORAP35398 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RORAP35398 AC018845.2-201ENST00000568326 409 ntBASIC16.33■□□□□ 0.2
RORAP35398 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.33■□□□□ 0.2
RORAP35398 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.33■□□□□ 0.2
RORAP35398 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.33■□□□□ 0.2
RORAP35398 AL691403.2-201ENST00000618460 490 ntBASIC16.33■□□□□ 0.2
RORAP35398 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
RORAP35398 AC092865.6-201ENST00000642101 219 ntBASIC16.33■□□□□ 0.2
RORAP35398 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RORAP35398 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RORAP35398 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RORAP35398 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RORAP35398 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.33■□□□□ 0.2
RORAP35398 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
RORAP35398 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RORAP35398 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
RORAP35398 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RORAP35398 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.33■□□□□ 0.2
RORAP35398 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.33■□□□□ 0.2
RORAP35398 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RORAP35398 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.33■□□□□ 0.2
RORAP35398 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RORAP35398 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RORAP35398 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RORAP35398 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RORAP35398 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
RORAP35398 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RORAP35398 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.32■□□□□ 0.2
RORAP35398 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RORAP35398 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RORAP35398 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RORAP35398 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
RORAP35398 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.32■□□□□ 0.2
RORAP35398 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.32■□□□□ 0.2
RORAP35398 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RORAP35398 AC092183.1-201ENST00000469884 875 ntBASIC16.32■□□□□ 0.2
RORAP35398 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.32■□□□□ 0.2
RORAP35398 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.32■□□□□ 0.2
RORAP35398 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RORAP35398 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RORAP35398 AC067852.2-201ENST00000590513 2313 ntBASIC16.32■□□□□ 0.2
RORAP35398 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RORAP35398 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RORAP35398 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.32■□□□□ 0.2
RORAP35398 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
RORAP35398 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.32■□□□□ 0.2
RORAP35398 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.32■□□□□ 0.2
RORAP35398 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RORAP35398 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RORAP35398 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
RORAP35398 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RORAP35398 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms