Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.15■□□□□ 0.5
RFC1P35251 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RFC1P35251 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.14■□□□□ 0.5
RFC1P35251 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RFC1P35251 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.14■□□□□ 0.49
RFC1P35251 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFC1P35251 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RFC1P35251 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFC1P35251 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RFC1P35251 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFC1P35251 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RFC1P35251 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFC1P35251 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RFC1P35251 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFC1P35251 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFC1P35251 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFC1P35251 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFC1P35251 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFC1P35251 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.14■□□□□ 0.49
RFC1P35251 KRT18P56-201ENST00000507275 550 ntBASIC18.14■□□□□ 0.49
RFC1P35251 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFC1P35251 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.14■□□□□ 0.49
RFC1P35251 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.14■□□□□ 0.49
RFC1P35251 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.14■□□□□ 0.49
RFC1P35251 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFC1P35251 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.14■□□□□ 0.49
RFC1P35251 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFC1P35251 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFC1P35251 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFC1P35251 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFC1P35251 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFC1P35251 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFC1P35251 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.14■□□□□ 0.49
RFC1P35251 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RFC1P35251 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RFC1P35251 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
RFC1P35251 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.13■□□□□ 0.49
RFC1P35251 EGFEM1P-202ENST00000431685 1563 ntBASIC18.13■□□□□ 0.49
RFC1P35251 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC1P35251 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC1P35251 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RFC1P35251 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC1P35251 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC1P35251 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC1P35251 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.13■□□□□ 0.49
RFC1P35251 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC1P35251 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC1P35251 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.13■□□□□ 0.49
RFC1P35251 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RFC1P35251 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC1P35251 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC1P35251 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC1P35251 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
RFC1P35251 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RFC1P35251 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC1P35251 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
RFC1P35251 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.13■□□□□ 0.49
RFC1P35251 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC1P35251 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RFC1P35251 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFC1P35251 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.12■□□□□ 0.49
RFC1P35251 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RFC1P35251 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFC1P35251 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFC1P35251 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFC1P35251 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.12■□□□□ 0.49
RFC1P35251 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC1P35251 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RFC1P35251 AC097637.2-201ENST00000624096 1997 ntBASIC18.12■□□□□ 0.49
RFC1P35251 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFC1P35251 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC1P35251 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC1P35251 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC1P35251 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFC1P35251 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFC1P35251 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC1P35251 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
RFC1P35251 RBM17P3-201ENST00000417687 1192 ntBASIC18.12■□□□□ 0.49
RFC1P35251 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFC1P35251 NKAPP1-205ENST00000585790 367 ntBASIC18.12■□□□□ 0.49
RFC1P35251 MTDHP3-201ENST00000594186 672 ntBASIC18.12■□□□□ 0.49
RFC1P35251 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.12■□□□□ 0.49
RFC1P35251 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC1P35251 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RFC1P35251 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC1P35251 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
RFC1P35251 AL121761.2-201ENST00000598007 1648 ntBASIC18.12■□□□□ 0.49
RFC1P35251 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC1P35251 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC1P35251 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFC1P35251 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFC1P35251 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RFC1P35251 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RFC1P35251 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RFC1P35251 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RFC1P35251 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.11■□□□□ 0.49
RFC1P35251 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFC1P35251 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFC1P35251 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFC1P35251 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms