Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
CKS2P33552 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC12.7□□□□□ -0.38
CKS2P33552 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 ISG20-202ENST00000379224 540 ntTSL 3 BASIC12.7□□□□□ -0.38
CKS2P33552 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC12.7□□□□□ -0.38
CKS2P33552 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 GRAMD4P1-201ENST00000435181 1110 ntBASIC12.7□□□□□ -0.38
CKS2P33552 AC026366.1-201ENST00000488803 879 ntBASIC12.7□□□□□ -0.38
CKS2P33552 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC12.7□□□□□ -0.38
CKS2P33552 REEP1-209ENST00000541910 969 ntTSL 2 BASIC12.7□□□□□ -0.38
CKS2P33552 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC12.7□□□□□ -0.38
CKS2P33552 AC010240.3-201ENST00000607688 395 ntBASIC12.7□□□□□ -0.38
CKS2P33552 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC12.7□□□□□ -0.38
CKS2P33552 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CKS2P33552 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CKS2P33552 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC12.7□□□□□ -0.38
CKS2P33552 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC12.7□□□□□ -0.38
CKS2P33552 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CKS2P33552 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
CKS2P33552 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CKS2P33552 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CKS2P33552 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS2P33552 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
CKS2P33552 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
CKS2P33552 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS2P33552 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC12.69□□□□□ -0.38
CKS2P33552 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS2P33552 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS2P33552 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS2P33552 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS2P33552 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS2P33552 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC12.69□□□□□ -0.38
CKS2P33552 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS2P33552 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
CKS2P33552 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CKS2P33552 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS2P33552 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
CKS2P33552 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC12.69□□□□□ -0.38
CKS2P33552 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC12.69□□□□□ -0.38
CKS2P33552 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC12.69□□□□□ -0.38
CKS2P33552 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CKS2P33552 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC12.69□□□□□ -0.38
CKS2P33552 DGCR10-201ENST00000609839 495 ntBASIC12.69□□□□□ -0.38
CKS2P33552 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC12.69□□□□□ -0.38
CKS2P33552 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS2P33552 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS2P33552 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC12.69□□□□□ -0.38
CKS2P33552 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CKS2P33552 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS2P33552 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CKS2P33552 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CKS2P33552 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CKS2P33552 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC12.69□□□□□ -0.38
CKS2P33552 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS2P33552 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS2P33552 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC12.69□□□□□ -0.38
CKS2P33552 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS2P33552 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.69□□□□□ -0.38
CKS2P33552 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CKS2P33552 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS2P33552 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS2P33552 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CKS2P33552 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS2P33552 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS2P33552 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS2P33552 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC12.69□□□□□ -0.38
CKS2P33552 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS2P33552 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CKS2P33552 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS2P33552 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS2P33552 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms