Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.7■□□□□ 0.9
CHMLP26374 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CHMLP26374 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.7■□□□□ 0.9
CHMLP26374 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.7■□□□□ 0.9
CHMLP26374 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMLP26374 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMLP26374 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.7■□□□□ 0.9
CHMLP26374 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CHMLP26374 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CHMLP26374 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.7■□□□□ 0.9
CHMLP26374 MTDHP4-201ENST00000600287 670 ntBASIC20.7■□□□□ 0.9
CHMLP26374 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.7■□□□□ 0.9
CHMLP26374 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.7■□□□□ 0.9
CHMLP26374 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CHMLP26374 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMLP26374 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMLP26374 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.7■□□□□ 0.9
CHMLP26374 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMLP26374 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHMLP26374 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CHMLP26374 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHMLP26374 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CHMLP26374 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMLP26374 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHMLP26374 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMLP26374 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
CHMLP26374 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMLP26374 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.69■□□□□ 0.9
CHMLP26374 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.69■□□□□ 0.9
CHMLP26374 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CHMLP26374 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMLP26374 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.69■□□□□ 0.9
CHMLP26374 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CHMLP26374 SAPCD2P3-201ENST00000455031 850 ntBASIC20.69■□□□□ 0.9
CHMLP26374 KRT18P56-201ENST00000507275 550 ntBASIC20.69■□□□□ 0.9
CHMLP26374 AL139424.1-201ENST00000607572 797 ntBASIC20.69■□□□□ 0.9
CHMLP26374 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.69■□□□□ 0.9
CHMLP26374 AL589182.2-201ENST00000619332 1049 ntBASIC20.69■□□□□ 0.9
CHMLP26374 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.69■□□□□ 0.9
CHMLP26374 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMLP26374 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
CHMLP26374 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CHMLP26374 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMLP26374 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHMLP26374 AL645728.1-201ENST00000366221 2101 ntBASIC20.69■□□□□ 0.9
CHMLP26374 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.69■□□□□ 0.9
CHMLP26374 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHMLP26374 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMLP26374 AC092171.3-201ENST00000610122 2651 ntBASIC20.69■□□□□ 0.9
CHMLP26374 PCDHA14-201ENST00000506751 2298 ntBASIC20.69■□□□□ 0.9
CHMLP26374 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMLP26374 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHMLP26374 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.68■□□□□ 0.9
CHMLP26374 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMLP26374 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.68■□□□□ 0.9
CHMLP26374 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMLP26374 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMLP26374 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CHMLP26374 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHMLP26374 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMLP26374 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMLP26374 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHMLP26374 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMLP26374 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.68■□□□□ 0.9
CHMLP26374 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.68■□□□□ 0.9
CHMLP26374 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.68■□□□□ 0.9
CHMLP26374 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CHMLP26374 AC025062.2-201ENST00000605477 670 ntBASIC20.68■□□□□ 0.9
CHMLP26374 IFNL4P1-201ENST00000607083 540 ntBASIC20.68■□□□□ 0.9
CHMLP26374 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHMLP26374 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
CHMLP26374 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20.68■□□□□ 0.9
CHMLP26374 AC243591.1-201ENST00000452967 1364 ntBASIC20.68■□□□□ 0.9
CHMLP26374 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMLP26374 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMLP26374 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMLP26374 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHMLP26374 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CHMLP26374 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMLP26374 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.67■□□□□ 0.9
CHMLP26374 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHMLP26374 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.67■□□□□ 0.9
CHMLP26374 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHMLP26374 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMLP26374 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.67■□□□□ 0.9
CHMLP26374 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.67■□□□□ 0.9
CHMLP26374 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
CHMLP26374 AC021087.4-201ENST00000563761 564 ntBASIC20.67■□□□□ 0.9
CHMLP26374 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.67■□□□□ 0.9
CHMLP26374 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.67■□□□□ 0.9
CHMLP26374 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.67■□□□□ 0.9
CHMLP26374 TERC-201ENST00000602385 541 ntBASIC20.67■□□□□ 0.9
CHMLP26374 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMLP26374 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CHMLP26374 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHMLP26374 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMLP26374 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHMLP26374 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMLP26374 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.67■□□□□ 0.9
CHMLP26374 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms