Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.3■□□□□ 0.36
KRT4P19013 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KRT4P19013 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.3■□□□□ 0.36
KRT4P19013 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT4P19013 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT4P19013 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT4P19013 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT4P19013 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
KRT4P19013 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT4P19013 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT4P19013 KRT18P22-201ENST00000402024 1347 ntBASIC17.29■□□□□ 0.36
KRT4P19013 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT4P19013 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT4P19013 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
KRT4P19013 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT4P19013 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT4P19013 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.29■□□□□ 0.36
KRT4P19013 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.29■□□□□ 0.36
KRT4P19013 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
KRT4P19013 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT4P19013 ZNF444P1-201ENST00000559497 298 ntBASIC17.29■□□□□ 0.36
KRT4P19013 MIR4497-201ENST00000583208 89 ntBASIC17.29■□□□□ 0.36
KRT4P19013 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.29■□□□□ 0.36
KRT4P19013 GPR32P1-201ENST00000601788 811 ntBASIC17.29■□□□□ 0.36
KRT4P19013 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT4P19013 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.29■□□□□ 0.36
KRT4P19013 AC132872.4-202ENST00000622924 2756 ntBASIC17.29■□□□□ 0.36
KRT4P19013 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT4P19013 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT4P19013 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT4P19013 AC092364.2-201ENST00000596710 2692 ntBASIC17.29■□□□□ 0.36
KRT4P19013 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT4P19013 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.29■□□□□ 0.36
KRT4P19013 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT4P19013 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT4P19013 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
KRT4P19013 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT4P19013 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT4P19013 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
KRT4P19013 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.29■□□□□ 0.36
KRT4P19013 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT4P19013 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT4P19013 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT4P19013 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT4P19013 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT4P19013 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
KRT4P19013 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT4P19013 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT4P19013 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KRT4P19013 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KRT4P19013 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.28■□□□□ 0.36
KRT4P19013 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
KRT4P19013 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT4P19013 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT4P19013 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT4P19013 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
KRT4P19013 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT4P19013 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KRT4P19013 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT4P19013 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT4P19013 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KRT4P19013 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.28■□□□□ 0.36
KRT4P19013 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT4P19013 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT4P19013 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
KRT4P19013 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
KRT4P19013 AL513523.2-202ENST00000427283 2040 ntBASIC17.28■□□□□ 0.36
KRT4P19013 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
KRT4P19013 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT4P19013 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT4P19013 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT4P19013 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
KRT4P19013 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.27■□□□□ 0.36
KRT4P19013 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.27■□□□□ 0.36
KRT4P19013 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.36
KRT4P19013 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KRT4P19013 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT4P19013 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT4P19013 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KRT4P19013 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT4P19013 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.27■□□□□ 0.36
KRT4P19013 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
KRT4P19013 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
KRT4P19013 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT4P19013 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT4P19013 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
KRT4P19013 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.27■□□□□ 0.36
KRT4P19013 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT4P19013 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT4P19013 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT4P19013 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT4P19013 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
KRT4P19013 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.27■□□□□ 0.36
KRT4P19013 AC092597.1-201ENST00000487352 616 ntBASIC17.27■□□□□ 0.36
KRT4P19013 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT4P19013 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KRT4P19013 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.27■□□□□ 0.36
KRT4P19013 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KRT4P19013 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.27■□□□□ 0.36
KRT4P19013 AL441883.1-201ENST00000566170 1045 ntBASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms