Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VCLP18206 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VCLP18206 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VCLP18206 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.34■□□□□ 0.37
VCLP18206 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.34■□□□□ 0.37
VCLP18206 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
VCLP18206 SCARNA2-201ENST00000458748 420 ntBASIC17.34■□□□□ 0.37
VCLP18206 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.34■□□□□ 0.37
VCLP18206 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.34■□□□□ 0.37
VCLP18206 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
VCLP18206 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.34■□□□□ 0.37
VCLP18206 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VCLP18206 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.34■□□□□ 0.37
VCLP18206 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.34■□□□□ 0.37
VCLP18206 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VCLP18206 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.34■□□□□ 0.37
VCLP18206 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VCLP18206 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.34■□□□□ 0.37
VCLP18206 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.34■□□□□ 0.37
VCLP18206 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VCLP18206 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
VCLP18206 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VCLP18206 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
VCLP18206 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VCLP18206 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
VCLP18206 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VCLP18206 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
VCLP18206 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.33■□□□□ 0.37
VCLP18206 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VCLP18206 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.33■□□□□ 0.37
VCLP18206 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VCLP18206 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
VCLP18206 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
VCLP18206 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
VCLP18206 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.33■□□□□ 0.37
VCLP18206 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
VCLP18206 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VCLP18206 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.33■□□□□ 0.37
VCLP18206 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
VCLP18206 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
VCLP18206 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VCLP18206 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.33■□□□□ 0.36
VCLP18206 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.33■□□□□ 0.36
VCLP18206 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VCLP18206 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VCLP18206 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.33■□□□□ 0.36
VCLP18206 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.33■□□□□ 0.36
VCLP18206 AC106795.1-205ENST00000512851 1056 ntBASIC17.33■□□□□ 0.36
VCLP18206 IGHV3-52-201ENST00000519770 353 ntBASIC17.33■□□□□ 0.36
VCLP18206 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VCLP18206 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VCLP18206 AC008608.2-201ENST00000606089 416 ntBASIC17.33■□□□□ 0.36
VCLP18206 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.33■□□□□ 0.36
VCLP18206 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.33■□□□□ 0.36
VCLP18206 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
VCLP18206 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VCLP18206 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
VCLP18206 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VCLP18206 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VCLP18206 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
VCLP18206 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
VCLP18206 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VCLP18206 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.33■□□□□ 0.36
VCLP18206 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
VCLP18206 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCLP18206 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.32■□□□□ 0.36
VCLP18206 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VCLP18206 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCLP18206 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VCLP18206 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCLP18206 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.32■□□□□ 0.36
VCLP18206 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCLP18206 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VCLP18206 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCLP18206 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VCLP18206 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.32■□□□□ 0.36
VCLP18206 AL121912.1-201ENST00000603683 238 ntBASIC17.32■□□□□ 0.36
VCLP18206 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
VCLP18206 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCLP18206 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
VCLP18206 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCLP18206 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCLP18206 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.32■□□□□ 0.36
VCLP18206 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCLP18206 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCLP18206 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.32■□□□□ 0.36
VCLP18206 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCLP18206 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.31■□□□□ 0.36
VCLP18206 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCLP18206 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VCLP18206 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.31■□□□□ 0.36
VCLP18206 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCLP18206 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCLP18206 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.31■□□□□ 0.36
VCLP18206 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCLP18206 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
VCLP18206 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
VCLP18206 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.31■□□□□ 0.36
VCLP18206 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCLP18206 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms