Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.3■□□□□ 0.36
CTPS1P17812 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.3■□□□□ 0.36
CTPS1P17812 MIR1199-201ENST00000621445 119 ntBASIC17.3■□□□□ 0.36
CTPS1P17812 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CTPS1P17812 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.3■□□□□ 0.36
CTPS1P17812 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTPS1P17812 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTPS1P17812 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTPS1P17812 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CTPS1P17812 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTPS1P17812 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTPS1P17812 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTPS1P17812 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.3■□□□□ 0.36
CTPS1P17812 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTPS1P17812 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.29■□□□□ 0.36
CTPS1P17812 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.29■□□□□ 0.36
CTPS1P17812 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CTPS1P17812 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CTPS1P17812 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTPS1P17812 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTPS1P17812 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTPS1P17812 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTPS1P17812 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTPS1P17812 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTPS1P17812 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTPS1P17812 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.29■□□□□ 0.36
CTPS1P17812 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.29■□□□□ 0.36
CTPS1P17812 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTPS1P17812 PTCHD3P3-201ENST00000403073 906 ntBASIC17.29■□□□□ 0.36
CTPS1P17812 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTPS1P17812 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.29■□□□□ 0.36
CTPS1P17812 AC136632.2-201ENST00000512891 861 ntBASIC17.29■□□□□ 0.36
CTPS1P17812 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTPS1P17812 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CTPS1P17812 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.29■□□□□ 0.36
CTPS1P17812 AC117500.6-201ENST00000624871 588 ntBASIC17.29■□□□□ 0.36
CTPS1P17812 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTPS1P17812 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTPS1P17812 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CTPS1P17812 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTPS1P17812 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CTPS1P17812 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTPS1P17812 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.29■□□□□ 0.36
CTPS1P17812 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTPS1P17812 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTPS1P17812 LTB4R2-202ENST00000528054 3092 ntBASIC17.29■□□□□ 0.36
CTPS1P17812 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.29■□□□□ 0.36
CTPS1P17812 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTPS1P17812 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTPS1P17812 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTPS1P17812 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CTPS1P17812 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTPS1P17812 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTPS1P17812 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTPS1P17812 IL9RP2-201ENST00000423948 1312 ntBASIC17.28■□□□□ 0.36
CTPS1P17812 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.28■□□□□ 0.36
CTPS1P17812 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTPS1P17812 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTPS1P17812 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTPS1P17812 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTPS1P17812 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTPS1P17812 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTPS1P17812 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTPS1P17812 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTPS1P17812 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.28■□□□□ 0.36
CTPS1P17812 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTPS1P17812 AL590627.1-203ENST00000421194 1026 ntBASIC17.28■□□□□ 0.36
CTPS1P17812 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.28■□□□□ 0.36
CTPS1P17812 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTPS1P17812 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.28■□□□□ 0.36
CTPS1P17812 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.28■□□□□ 0.36
CTPS1P17812 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.28■□□□□ 0.36
CTPS1P17812 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.28■□□□□ 0.36
CTPS1P17812 AC120114.3-201ENST00000611923 658 ntBASIC17.28■□□□□ 0.36
CTPS1P17812 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTPS1P17812 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.28■□□□□ 0.36
CTPS1P17812 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTPS1P17812 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CTPS1P17812 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTPS1P17812 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTPS1P17812 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CTPS1P17812 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTPS1P17812 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.28■□□□□ 0.36
CTPS1P17812 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CTPS1P17812 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.27■□□□□ 0.36
CTPS1P17812 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTPS1P17812 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTPS1P17812 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CTPS1P17812 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CTPS1P17812 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.36
CTPS1P17812 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CTPS1P17812 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CTPS1P17812 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTPS1P17812 GPR89P-201ENST00000407924 1495 ntBASIC17.27■□□□□ 0.36
CTPS1P17812 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.27■□□□□ 0.36
CTPS1P17812 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.27■□□□□ 0.36
CTPS1P17812 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CTPS1P17812 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CTPS1P17812 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.27■□□□□ 0.36
CTPS1P17812 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms