Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRFP11831 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SRFP11831 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SRFP11831 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRFP11831 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRFP11831 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SRFP11831 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRFP11831 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SRFP11831 AP3S2-216ENST00000617003 1561 ntBASIC17.21■□□□□ 0.35
SRFP11831 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.21■□□□□ 0.35
SRFP11831 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.21■□□□□ 0.35
SRFP11831 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.21■□□□□ 0.35
SRFP11831 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SRFP11831 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SRFP11831 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
SRFP11831 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SRFP11831 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.21■□□□□ 0.35
SRFP11831 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SRFP11831 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.21■□□□□ 0.35
SRFP11831 U91328.1-201ENST00000437528 223 ntBASIC17.21■□□□□ 0.35
SRFP11831 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.21■□□□□ 0.35
SRFP11831 GPR53P-205ENST00000457298 1084 ntBASIC17.21■□□□□ 0.35
SRFP11831 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SRFP11831 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.21■□□□□ 0.35
SRFP11831 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.21■□□□□ 0.35
SRFP11831 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.21■□□□□ 0.35
SRFP11831 TP53TG3HP-202ENST00000569755 579 ntBASIC17.21■□□□□ 0.35
SRFP11831 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.21■□□□□ 0.35
SRFP11831 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRFP11831 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.21■□□□□ 0.35
SRFP11831 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRFP11831 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.21■□□□□ 0.35
SRFP11831 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRFP11831 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SRFP11831 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRFP11831 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SRFP11831 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
SRFP11831 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
SRFP11831 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SRFP11831 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
SRFP11831 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRFP11831 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRFP11831 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SRFP11831 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.2■□□□□ 0.34
SRFP11831 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SRFP11831 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SRFP11831 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
SRFP11831 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SRFP11831 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SRFP11831 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SRFP11831 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SRFP11831 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.2■□□□□ 0.34
SRFP11831 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.2■□□□□ 0.34
SRFP11831 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.2■□□□□ 0.34
SRFP11831 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.2■□□□□ 0.34
SRFP11831 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.2■□□□□ 0.34
SRFP11831 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.2■□□□□ 0.34
SRFP11831 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.2■□□□□ 0.34
SRFP11831 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRFP11831 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.2■□□□□ 0.34
SRFP11831 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.2■□□□□ 0.34
SRFP11831 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.2■□□□□ 0.34
SRFP11831 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SRFP11831 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRFP11831 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SRFP11831 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SRFP11831 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.2■□□□□ 0.34
SRFP11831 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRFP11831 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SRFP11831 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRFP11831 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.2■□□□□ 0.34
SRFP11831 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRFP11831 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRFP11831 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRFP11831 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRFP11831 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SRFP11831 AC138028.4-201ENST00000564984 1845 ntBASIC17.19■□□□□ 0.34
SRFP11831 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRFP11831 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SRFP11831 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRFP11831 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRFP11831 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.19■□□□□ 0.34
SRFP11831 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SRFP11831 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRFP11831 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.19■□□□□ 0.34
SRFP11831 AC009477.1-201ENST00000452936 217 ntBASIC17.19■□□□□ 0.34
SRFP11831 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.19■□□□□ 0.34
SRFP11831 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SRFP11831 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRFP11831 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.19■□□□□ 0.34
SRFP11831 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.19■□□□□ 0.34
SRFP11831 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.19■□□□□ 0.34
SRFP11831 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRFP11831 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SRFP11831 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRFP11831 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.19■□□□□ 0.34
SRFP11831 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.19■□□□□ 0.34
SRFP11831 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SRFP11831 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRFP11831 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms