Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.48■□□□□ 0.71
PTPRFP10586 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.48■□□□□ 0.71
PTPRFP10586 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PTPRFP10586 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.48■□□□□ 0.71
PTPRFP10586 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPRFP10586 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPRFP10586 COX5BP8-201ENST00000416911 349 ntBASIC19.48■□□□□ 0.71
PTPRFP10586 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.48■□□□□ 0.71
PTPRFP10586 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.48■□□□□ 0.71
PTPRFP10586 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.48■□□□□ 0.71
PTPRFP10586 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.48■□□□□ 0.71
PTPRFP10586 AC010336.2-201ENST00000564226 506 ntBASIC19.48■□□□□ 0.71
PTPRFP10586 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC19.48■□□□□ 0.71
PTPRFP10586 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.48■□□□□ 0.71
PTPRFP10586 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPRFP10586 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPRFP10586 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPRFP10586 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPRFP10586 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.47■□□□□ 0.71
PTPRFP10586 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPRFP10586 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.47■□□□□ 0.71
PTPRFP10586 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.47■□□□□ 0.71
PTPRFP10586 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPRFP10586 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PTPRFP10586 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTPRFP10586 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPRFP10586 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTPRFP10586 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTPRFP10586 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTPRFP10586 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.47■□□□□ 0.71
PTPRFP10586 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.47■□□□□ 0.71
PTPRFP10586 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTPRFP10586 AC004790.1-201ENST00000612686 536 ntBASIC19.47■□□□□ 0.71
PTPRFP10586 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTPRFP10586 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PTPRFP10586 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PTPRFP10586 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPRFP10586 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PTPRFP10586 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPRFP10586 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.47■□□□□ 0.71
PTPRFP10586 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPRFP10586 MIR346-201ENST00000362234 95 ntBASIC19.47■□□□□ 0.71
PTPRFP10586 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPRFP10586 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTPRFP10586 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTPRFP10586 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.47■□□□□ 0.71
PTPRFP10586 PRYP6-201ENST00000514804 343 ntBASIC19.47■□□□□ 0.71
PTPRFP10586 AL138918.1-201ENST00000568306 659 ntBASIC19.47■□□□□ 0.71
PTPRFP10586 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.47■□□□□ 0.71
PTPRFP10586 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPRFP10586 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PTPRFP10586 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.47■□□□□ 0.71
PTPRFP10586 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.46■□□□□ 0.71
PTPRFP10586 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PTPRFP10586 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.46■□□□□ 0.71
PTPRFP10586 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPRFP10586 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPRFP10586 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPRFP10586 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.46■□□□□ 0.71
PTPRFP10586 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.46■□□□□ 0.71
PTPRFP10586 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTPRFP10586 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPRFP10586 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PTPRFP10586 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PTPRFP10586 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPRFP10586 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPRFP10586 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPRFP10586 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
PTPRFP10586 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PTPRFP10586 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPRFP10586 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.46■□□□□ 0.71
PTPRFP10586 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPRFP10586 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTPRFP10586 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTPRFP10586 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.46■□□□□ 0.71
PTPRFP10586 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PTPRFP10586 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.46■□□□□ 0.71
PTPRFP10586 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTPRFP10586 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPRFP10586 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.45■□□□□ 0.7
PTPRFP10586 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.45■□□□□ 0.7
PTPRFP10586 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.45■□□□□ 0.7
PTPRFP10586 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC19.45■□□□□ 0.7
PTPRFP10586 AL080243.2-201ENST00000418783 582 ntBASIC19.45■□□□□ 0.7
PTPRFP10586 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.45■□□□□ 0.7
PTPRFP10586 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.45■□□□□ 0.7
PTPRFP10586 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
PTPRFP10586 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.45■□□□□ 0.7
PTPRFP10586 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PTPRFP10586 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPRFP10586 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTPRFP10586 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PTPRFP10586 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PTPRFP10586 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPRFP10586 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTPRFP10586 AL138688.1-201ENST00000624851 1594 ntBASIC19.45■□□□□ 0.7
PTPRFP10586 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTPRFP10586 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.45■□□□□ 0.7
PTPRFP10586 WASH4P-201ENST00000564273 1246 ntBASIC19.45■□□□□ 0.7
PTPRFP10586 AC009118.2-201ENST00000613275 655 ntBASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms