Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RARAP10276 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.07■□□□□ 0.48
RARAP10276 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
RARAP10276 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
RARAP10276 NUS1P2-201ENST00000417358 873 ntBASIC18.07■□□□□ 0.48
RARAP10276 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RARAP10276 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.07■□□□□ 0.48
RARAP10276 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
RARAP10276 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RARAP10276 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.07■□□□□ 0.48
RARAP10276 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.07■□□□□ 0.48
RARAP10276 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RARAP10276 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.07■□□□□ 0.48
RARAP10276 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RARAP10276 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RARAP10276 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.07■□□□□ 0.48
RARAP10276 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RARAP10276 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RARAP10276 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RARAP10276 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RARAP10276 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RARAP10276 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RARAP10276 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.07■□□□□ 0.48
RARAP10276 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.07■□□□□ 0.48
RARAP10276 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.07■□□□□ 0.48
RARAP10276 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RARAP10276 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.06■□□□□ 0.48
RARAP10276 AC092068.3-201ENST00000587894 2016 ntBASIC18.06■□□□□ 0.48
RARAP10276 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RARAP10276 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RARAP10276 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RARAP10276 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RARAP10276 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RARAP10276 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RARAP10276 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.06■□□□□ 0.48
RARAP10276 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
RARAP10276 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RARAP10276 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RARAP10276 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.06■□□□□ 0.48
RARAP10276 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.06■□□□□ 0.48
RARAP10276 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.06■□□□□ 0.48
RARAP10276 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.06■□□□□ 0.48
RARAP10276 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.06■□□□□ 0.48
RARAP10276 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RARAP10276 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.06■□□□□ 0.48
RARAP10276 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RARAP10276 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RARAP10276 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RARAP10276 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RARAP10276 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RARAP10276 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RARAP10276 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.06■□□□□ 0.48
RARAP10276 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RARAP10276 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.06■□□□□ 0.48
RARAP10276 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RARAP10276 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RARAP10276 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.06■□□□□ 0.48
RARAP10276 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RARAP10276 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RARAP10276 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
RARAP10276 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.05■□□□□ 0.48
RARAP10276 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RARAP10276 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
RARAP10276 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RARAP10276 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
RARAP10276 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RARAP10276 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.05■□□□□ 0.48
RARAP10276 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RARAP10276 AC078925.2-201ENST00000624013 1973 ntBASIC18.05■□□□□ 0.48
RARAP10276 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
RARAP10276 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.05■□□□□ 0.48
RARAP10276 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.05■□□□□ 0.48
RARAP10276 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.05■□□□□ 0.48
RARAP10276 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.05■□□□□ 0.48
RARAP10276 AC138894.3-201ENST00000603787 634 ntBASIC18.05■□□□□ 0.48
RARAP10276 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RARAP10276 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.05■□□□□ 0.48
RARAP10276 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.05■□□□□ 0.48
RARAP10276 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.05■□□□□ 0.48
RARAP10276 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.05■□□□□ 0.48
RARAP10276 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.05■□□□□ 0.48
RARAP10276 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RARAP10276 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.05■□□□□ 0.48
RARAP10276 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
RARAP10276 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RARAP10276 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RARAP10276 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RARAP10276 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
RARAP10276 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
RARAP10276 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RARAP10276 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RARAP10276 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RARAP10276 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RARAP10276 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.04■□□□□ 0.48
RARAP10276 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RARAP10276 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
RARAP10276 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
RARAP10276 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.04■□□□□ 0.48
RARAP10276 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RARAP10276 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms