Protein–RNA interactions for Protein: P0CJ79

ZNF888, Zinc finger protein 888, humanhuman

Predicted RBP Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF888P0CJ79 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
ZNF888P0CJ79 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.33■□□□□ 0.2
ZNF888P0CJ79 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.33■□□□□ 0.2
ZNF888P0CJ79 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.33■□□□□ 0.2
ZNF888P0CJ79 AL356488.2-201ENST00000602755 427 ntBASIC16.33■□□□□ 0.2
ZNF888P0CJ79 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.33■□□□□ 0.2
ZNF888P0CJ79 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.33■□□□□ 0.2
ZNF888P0CJ79 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF888P0CJ79 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
ZNF888P0CJ79 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.33■□□□□ 0.2
ZNF888P0CJ79 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF888P0CJ79 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ZNF888P0CJ79 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF888P0CJ79 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
ZNF888P0CJ79 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ZNF888P0CJ79 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
ZNF888P0CJ79 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.33■□□□□ 0.2
ZNF888P0CJ79 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF888P0CJ79 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF888P0CJ79 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF888P0CJ79 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.33■□□□□ 0.2
ZNF888P0CJ79 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF888P0CJ79 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF888P0CJ79 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF888P0CJ79 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF888P0CJ79 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ZNF888P0CJ79 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF888P0CJ79 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF888P0CJ79 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ZNF888P0CJ79 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF888P0CJ79 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.32■□□□□ 0.2
ZNF888P0CJ79 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF888P0CJ79 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF888P0CJ79 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.32■□□□□ 0.2
ZNF888P0CJ79 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF888P0CJ79 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.32■□□□□ 0.2
ZNF888P0CJ79 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF888P0CJ79 AC243591.1-201ENST00000452967 1364 ntBASIC16.32■□□□□ 0.2
ZNF888P0CJ79 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.32■□□□□ 0.2
ZNF888P0CJ79 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF888P0CJ79 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF888P0CJ79 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF888P0CJ79 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.32■□□□□ 0.2
ZNF888P0CJ79 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF888P0CJ79 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.32■□□□□ 0.2
ZNF888P0CJ79 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF888P0CJ79 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
ZNF888P0CJ79 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.32■□□□□ 0.2
ZNF888P0CJ79 AP001094.4-201ENST00000579008 2176 ntBASIC16.32■□□□□ 0.2
ZNF888P0CJ79 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.32■□□□□ 0.2
ZNF888P0CJ79 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ZNF888P0CJ79 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF888P0CJ79 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF888P0CJ79 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF888P0CJ79 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF888P0CJ79 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ZNF888P0CJ79 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF888P0CJ79 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ZNF888P0CJ79 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 AC092053.1-201ENST00000605787 1936 ntBASIC16.31■□□□□ 0.2
ZNF888P0CJ79 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 AC116407.3-201ENST00000623905 1129 ntBASIC16.31■□□□□ 0.2
ZNF888P0CJ79 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF888P0CJ79 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.3■□□□□ 0.2
ZNF888P0CJ79 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms