Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TPM2P07951 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TPM2P07951 KRT8P9-201ENST00000558927 1449 ntBASIC19.62■□□□□ 0.73
TPM2P07951 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TPM2P07951 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TPM2P07951 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TPM2P07951 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TPM2P07951 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TPM2P07951 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.62■□□□□ 0.73
TPM2P07951 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TPM2P07951 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.62■□□□□ 0.73
TPM2P07951 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.62■□□□□ 0.73
TPM2P07951 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TPM2P07951 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TPM2P07951 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TPM2P07951 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TPM2P07951 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TPM2P07951 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TPM2P07951 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TPM2P07951 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TPM2P07951 HLA-J-201ENST00000462773 1622 ntBASIC19.62■□□□□ 0.73
TPM2P07951 FAM45BP-202ENST00000592932 1624 ntBASIC19.62■□□□□ 0.73
TPM2P07951 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC19.62■□□□□ 0.73
TPM2P07951 AC126177.1-201ENST00000547829 2218 ntBASIC19.61■□□□□ 0.73
TPM2P07951 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TPM2P07951 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TPM2P07951 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TPM2P07951 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TPM2P07951 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TPM2P07951 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TPM2P07951 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.61■□□□□ 0.73
TPM2P07951 ECEL1P3-201ENST00000427961 737 ntBASIC19.61■□□□□ 0.73
TPM2P07951 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TPM2P07951 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
TPM2P07951 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.61■□□□□ 0.73
TPM2P07951 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TPM2P07951 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.61■□□□□ 0.73
TPM2P07951 LINC01451-201ENST00000623792 534 ntBASIC19.61■□□□□ 0.73
TPM2P07951 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
TPM2P07951 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TPM2P07951 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.61■□□□□ 0.73
TPM2P07951 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TPM2P07951 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TPM2P07951 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TPM2P07951 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TPM2P07951 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TPM2P07951 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TPM2P07951 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TPM2P07951 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TPM2P07951 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TPM2P07951 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM2P07951 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
TPM2P07951 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM2P07951 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TPM2P07951 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM2P07951 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM2P07951 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM2P07951 KRT18P22-201ENST00000402024 1347 ntBASIC19.6■□□□□ 0.73
TPM2P07951 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.6■□□□□ 0.73
TPM2P07951 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM2P07951 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TPM2P07951 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.6■□□□□ 0.73
TPM2P07951 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.6■□□□□ 0.73
TPM2P07951 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TPM2P07951 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.6■□□□□ 0.73
TPM2P07951 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.6■□□□□ 0.73
TPM2P07951 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.6■□□□□ 0.73
TPM2P07951 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TPM2P07951 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM2P07951 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM2P07951 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TPM2P07951 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM2P07951 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.6■□□□□ 0.73
TPM2P07951 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM2P07951 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM2P07951 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TPM2P07951 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
TPM2P07951 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.6■□□□□ 0.73
TPM2P07951 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
TPM2P07951 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM2P07951 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM2P07951 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.59■□□□□ 0.73
TPM2P07951 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM2P07951 LINC01568-207ENST00000641790 1380 ntBASIC19.59■□□□□ 0.73
TPM2P07951 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.59■□□□□ 0.73
TPM2P07951 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM2P07951 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM2P07951 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.59■□□□□ 0.73
TPM2P07951 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM2P07951 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM2P07951 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.59■□□□□ 0.73
TPM2P07951 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.59■□□□□ 0.73
TPM2P07951 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.59■□□□□ 0.73
TPM2P07951 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM2P07951 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.59■□□□□ 0.73
TPM2P07951 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM2P07951 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM2P07951 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TPM2P07951 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM2P07951 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms