Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
PDGFAP04085 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.1■□□□□ 0.17
PDGFAP04085 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFAP04085 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFAP04085 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFAP04085 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFAP04085 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PDGFAP04085 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFAP04085 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.1■□□□□ 0.17
PDGFAP04085 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PDGFAP04085 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFAP04085 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFAP04085 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFAP04085 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PDGFAP04085 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
PDGFAP04085 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFAP04085 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PDGFAP04085 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PDGFAP04085 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFAP04085 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFAP04085 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFAP04085 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFAP04085 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFAP04085 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.1■□□□□ 0.17
PDGFAP04085 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.1■□□□□ 0.17
PDGFAP04085 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.1■□□□□ 0.17
PDGFAP04085 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.1■□□□□ 0.17
PDGFAP04085 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.1■□□□□ 0.17
PDGFAP04085 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFAP04085 MKNK2P1-201ENST00000437526 628 ntBASIC16.1■□□□□ 0.17
PDGFAP04085 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.1■□□□□ 0.17
PDGFAP04085 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.1■□□□□ 0.17
PDGFAP04085 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
PDGFAP04085 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.1■□□□□ 0.17
PDGFAP04085 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.1■□□□□ 0.17
PDGFAP04085 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.1■□□□□ 0.17
PDGFAP04085 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.1■□□□□ 0.17
PDGFAP04085 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFAP04085 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFAP04085 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFAP04085 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.1■□□□□ 0.17
PDGFAP04085 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFAP04085 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
PDGFAP04085 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFAP04085 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFAP04085 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFAP04085 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFAP04085 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
PDGFAP04085 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.1■□□□□ 0.17
PDGFAP04085 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFAP04085 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.1■□□□□ 0.17
PDGFAP04085 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFAP04085 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PDGFAP04085 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFAP04085 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDGFAP04085 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDGFAP04085 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDGFAP04085 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
PDGFAP04085 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.09■□□□□ 0.17
PDGFAP04085 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.09■□□□□ 0.17
PDGFAP04085 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDGFAP04085 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDGFAP04085 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDGFAP04085 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDGFAP04085 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDGFAP04085 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDGFAP04085 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.09■□□□□ 0.17
PDGFAP04085 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.09■□□□□ 0.17
PDGFAP04085 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.09■□□□□ 0.17
PDGFAP04085 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PDGFAP04085 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
PDGFAP04085 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDGFAP04085 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.09■□□□□ 0.17
PDGFAP04085 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.09■□□□□ 0.17
PDGFAP04085 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.09■□□□□ 0.17
PDGFAP04085 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.09■□□□□ 0.17
PDGFAP04085 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PDGFAP04085 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.09■□□□□ 0.17
PDGFAP04085 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.09■□□□□ 0.17
PDGFAP04085 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PDGFAP04085 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.09■□□□□ 0.17
PDGFAP04085 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDGFAP04085 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDGFAP04085 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDGFAP04085 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PDGFAP04085 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.09■□□□□ 0.17
PDGFAP04085 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDGFAP04085 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDGFAP04085 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PDGFAP04085 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PDGFAP04085 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.09■□□□□ 0.17
PDGFAP04085 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
PDGFAP04085 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
PDGFAP04085 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
PDGFAP04085 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PDGFAP04085 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PDGFAP04085 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
PDGFAP04085 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PDGFAP04085 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
PDGFAP04085 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms