Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.44□□□□□ -0.1
SIX6O95475 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SIX6O95475 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIX6O95475 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.43□□□□□ -0.1
SIX6O95475 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX6O95475 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX6O95475 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC14.43□□□□□ -0.1
SIX6O95475 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX6O95475 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX6O95475 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
SIX6O95475 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX6O95475 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.43□□□□□ -0.1
SIX6O95475 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX6O95475 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SIX6O95475 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SIX6O95475 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX6O95475 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.43□□□□□ -0.1
SIX6O95475 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX6O95475 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX6O95475 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX6O95475 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX6O95475 KSR1P1-201ENST00000446298 240 ntBASIC14.43□□□□□ -0.1
SIX6O95475 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.43□□□□□ -0.1
SIX6O95475 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC14.43□□□□□ -0.1
SIX6O95475 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SIX6O95475 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC14.43□□□□□ -0.1
SIX6O95475 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
SIX6O95475 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX6O95475 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX6O95475 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SIX6O95475 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SIX6O95475 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX6O95475 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX6O95475 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX6O95475 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SIX6O95475 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX6O95475 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX6O95475 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SIX6O95475 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SIX6O95475 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX6O95475 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX6O95475 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
SIX6O95475 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX6O95475 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.43□□□□□ -0.1
SIX6O95475 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX6O95475 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX6O95475 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.42□□□□□ -0.1
SIX6O95475 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC14.42□□□□□ -0.1
SIX6O95475 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.42□□□□□ -0.1
SIX6O95475 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIX6O95475 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.42□□□□□ -0.1
SIX6O95475 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIX6O95475 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIX6O95475 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SIX6O95475 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.42□□□□□ -0.1
SIX6O95475 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SIX6O95475 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIX6O95475 AC126755.1-201ENST00000525846 6405 ntBASIC14.42□□□□□ -0.1
SIX6O95475 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIX6O95475 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.42□□□□□ -0.1
SIX6O95475 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SIX6O95475 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SIX6O95475 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC14.42□□□□□ -0.1
SIX6O95475 GUSBP6-202ENST00000438529 1198 ntBASIC14.42□□□□□ -0.1
SIX6O95475 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SIX6O95475 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIX6O95475 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC14.42□□□□□ -0.1
SIX6O95475 AL139327.4-201ENST00000612362 153 ntBASIC14.42□□□□□ -0.1
SIX6O95475 CR392000.1-201ENST00000624770 1228 ntBASIC14.42□□□□□ -0.1
SIX6O95475 AL031985.4-201ENST00000642138 673 ntBASIC14.42□□□□□ -0.1
SIX6O95475 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SIX6O95475 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.42□□□□□ -0.1
SIX6O95475 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SIX6O95475 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SIX6O95475 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIX6O95475 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.42□□□□□ -0.1
SIX6O95475 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIX6O95475 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIX6O95475 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIX6O95475 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIX6O95475 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SIX6O95475 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIX6O95475 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SIX6O95475 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SIX6O95475 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIX6O95475 HLA-A-202ENST00000376806 1854 ntBASIC14.42□□□□□ -0.1
SIX6O95475 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SIX6O95475 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIX6O95475 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.42□□□□□ -0.1
SIX6O95475 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIX6O95475 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIX6O95475 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIX6O95475 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.41□□□□□ -0.1
SIX6O95475 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX6O95475 KRT16P1-201ENST00000399124 1418 ntBASIC14.41□□□□□ -0.1
SIX6O95475 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SIX6O95475 FLJ16779-201ENST00000612722 7638 ntBASIC14.41□□□□□ -0.1
SIX6O95475 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SIX6O95475 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX6O95475 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms