Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.87■□□□□ 0.45
LRCH4O75427 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH4O75427 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH4O75427 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH4O75427 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH4O75427 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH4O75427 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.87■□□□□ 0.45
LRCH4O75427 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH4O75427 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH4O75427 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LRCH4O75427 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH4O75427 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH4O75427 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
LRCH4O75427 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH4O75427 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.87■□□□□ 0.45
LRCH4O75427 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.87■□□□□ 0.45
LRCH4O75427 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH4O75427 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH4O75427 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH4O75427 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH4O75427 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.87■□□□□ 0.45
LRCH4O75427 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.87■□□□□ 0.45
LRCH4O75427 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
LRCH4O75427 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.87■□□□□ 0.45
LRCH4O75427 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.87■□□□□ 0.45
LRCH4O75427 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.87■□□□□ 0.45
LRCH4O75427 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.87■□□□□ 0.45
LRCH4O75427 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.87■□□□□ 0.45
LRCH4O75427 IFNL4P1-201ENST00000607083 540 ntBASIC17.87■□□□□ 0.45
LRCH4O75427 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH4O75427 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
LRCH4O75427 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.87■□□□□ 0.45
LRCH4O75427 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.87■□□□□ 0.45
LRCH4O75427 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.87■□□□□ 0.45
LRCH4O75427 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH4O75427 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH4O75427 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
LRCH4O75427 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH4O75427 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
LRCH4O75427 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH4O75427 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH4O75427 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.87■□□□□ 0.45
LRCH4O75427 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.87■□□□□ 0.45
LRCH4O75427 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH4O75427 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.87■□□□□ 0.45
LRCH4O75427 PCDHB17P-201ENST00000539533 2393 ntBASIC17.87■□□□□ 0.45
LRCH4O75427 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.87■□□□□ 0.45
LRCH4O75427 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH4O75427 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH4O75427 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH4O75427 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
LRCH4O75427 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH4O75427 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH4O75427 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
LRCH4O75427 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH4O75427 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
LRCH4O75427 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH4O75427 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH4O75427 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH4O75427 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.86■□□□□ 0.45
LRCH4O75427 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH4O75427 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
LRCH4O75427 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
LRCH4O75427 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.86■□□□□ 0.45
LRCH4O75427 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.86■□□□□ 0.45
LRCH4O75427 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.86■□□□□ 0.45
LRCH4O75427 AL589182.2-201ENST00000619332 1049 ntBASIC17.86■□□□□ 0.45
LRCH4O75427 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.86■□□□□ 0.45
LRCH4O75427 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.86■□□□□ 0.45
LRCH4O75427 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH4O75427 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH4O75427 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH4O75427 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
LRCH4O75427 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH4O75427 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
LRCH4O75427 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRCH4O75427 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRCH4O75427 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRCH4O75427 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRCH4O75427 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.85■□□□□ 0.45
LRCH4O75427 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRCH4O75427 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRCH4O75427 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRCH4O75427 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRCH4O75427 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRCH4O75427 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRCH4O75427 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.85■□□□□ 0.45
LRCH4O75427 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRCH4O75427 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.85■□□□□ 0.45
LRCH4O75427 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRCH4O75427 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
LRCH4O75427 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.85■□□□□ 0.45
LRCH4O75427 UNC93B7-201ENST00000509439 705 ntBASIC17.85■□□□□ 0.45
LRCH4O75427 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.85■□□□□ 0.45
LRCH4O75427 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.85■□□□□ 0.45
LRCH4O75427 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.85■□□□□ 0.45
LRCH4O75427 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
LRCH4O75427 MTDHP4-201ENST00000600287 670 ntBASIC17.85■□□□□ 0.45
LRCH4O75427 AL139424.1-201ENST00000607572 797 ntBASIC17.85■□□□□ 0.45
LRCH4O75427 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms