Protein–RNA interactions for Protein: O60504

SORBS3, Vinexin, humanhuman

Predictions only

Length 671 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3O60504 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.33■□□□□ 0.68
SORBS3O60504 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SORBS3O60504 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SORBS3O60504 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SORBS3O60504 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SORBS3O60504 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.33■□□□□ 0.68
SORBS3O60504 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SORBS3O60504 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.33■□□□□ 0.68
SORBS3O60504 AC092919.2-201ENST00000623631 1645 ntBASIC19.33■□□□□ 0.68
SORBS3O60504 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.32■□□□□ 0.68
SORBS3O60504 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SORBS3O60504 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SORBS3O60504 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SORBS3O60504 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SORBS3O60504 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SORBS3O60504 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.32■□□□□ 0.68
SORBS3O60504 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.32■□□□□ 0.68
SORBS3O60504 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SORBS3O60504 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SORBS3O60504 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SORBS3O60504 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SORBS3O60504 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SORBS3O60504 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SORBS3O60504 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.32■□□□□ 0.68
SORBS3O60504 FAM58CP-201ENST00000435741 640 ntBASIC19.32■□□□□ 0.68
SORBS3O60504 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.32■□□□□ 0.68
SORBS3O60504 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.32■□□□□ 0.68
SORBS3O60504 AL031432.2-201ENST00000566714 459 ntBASIC19.32■□□□□ 0.68
SORBS3O60504 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
SORBS3O60504 AL928711.1-201ENST00000570165 459 ntBASIC19.32■□□□□ 0.68
SORBS3O60504 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.32■□□□□ 0.68
SORBS3O60504 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.32■□□□□ 0.68
SORBS3O60504 C20orf181-201ENST00000623918 480 ntBASIC19.32■□□□□ 0.68
SORBS3O60504 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.32■□□□□ 0.68
SORBS3O60504 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SORBS3O60504 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SORBS3O60504 AC067852.2-201ENST00000590513 2313 ntBASIC19.32■□□□□ 0.68
SORBS3O60504 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.32■□□□□ 0.68
SORBS3O60504 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SORBS3O60504 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SORBS3O60504 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SORBS3O60504 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.32■□□□□ 0.68
SORBS3O60504 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SORBS3O60504 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SORBS3O60504 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SORBS3O60504 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SORBS3O60504 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.31■□□□□ 0.68
SORBS3O60504 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SORBS3O60504 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SORBS3O60504 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
SORBS3O60504 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
SORBS3O60504 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
SORBS3O60504 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SORBS3O60504 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SORBS3O60504 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
SORBS3O60504 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.31■□□□□ 0.68
SORBS3O60504 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.31■□□□□ 0.68
SORBS3O60504 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.31■□□□□ 0.68
SORBS3O60504 AC087163.2-201ENST00000457299 853 ntBASIC19.31■□□□□ 0.68
SORBS3O60504 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.31■□□□□ 0.68
SORBS3O60504 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.31■□□□□ 0.68
SORBS3O60504 SNHG9-202ENST00000564014 471 ntBASIC19.31■□□□□ 0.68
SORBS3O60504 AC023141.13-201ENST00000604991 943 ntBASIC19.31■□□□□ 0.68
SORBS3O60504 AC079781.4-201ENST00000641908 219 ntBASIC19.31■□□□□ 0.68
SORBS3O60504 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SORBS3O60504 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SORBS3O60504 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SORBS3O60504 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SORBS3O60504 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SORBS3O60504 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SORBS3O60504 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SORBS3O60504 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SORBS3O60504 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SORBS3O60504 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SORBS3O60504 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.31■□□□□ 0.68
SORBS3O60504 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.31■□□□□ 0.68
SORBS3O60504 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SORBS3O60504 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.3■□□□□ 0.68
SORBS3O60504 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SORBS3O60504 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SORBS3O60504 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SORBS3O60504 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SORBS3O60504 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SORBS3O60504 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.3■□□□□ 0.68
SORBS3O60504 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SORBS3O60504 PMS2P2-201ENST00000425039 1128 ntBASIC19.3■□□□□ 0.68
SORBS3O60504 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
SORBS3O60504 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.3■□□□□ 0.68
SORBS3O60504 RHOQP3-201ENST00000437982 621 ntBASIC19.3■□□□□ 0.68
SORBS3O60504 AL513480.1-201ENST00000451731 511 ntBASIC19.3■□□□□ 0.68
SORBS3O60504 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.3■□□□□ 0.68
SORBS3O60504 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
SORBS3O60504 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.3■□□□□ 0.68
SORBS3O60504 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.3■□□□□ 0.68
SORBS3O60504 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.3■□□□□ 0.68
SORBS3O60504 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SORBS3O60504 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
SORBS3O60504 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.3■□□□□ 0.68
SORBS3O60504 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SORBS3O60504 AC133963.1-201ENST00000504166 1679 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms