Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.4■□□□□ 0.54
FOXN3O00409 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.4■□□□□ 0.54
FOXN3O00409 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN3O00409 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN3O00409 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN3O00409 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.4■□□□□ 0.54
FOXN3O00409 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXN3O00409 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN3O00409 AC078925.2-201ENST00000624013 1973 ntBASIC18.4■□□□□ 0.54
FOXN3O00409 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN3O00409 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.4■□□□□ 0.54
FOXN3O00409 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN3O00409 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.4■□□□□ 0.54
FOXN3O00409 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXN3O00409 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN3O00409 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
FOXN3O00409 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
FOXN3O00409 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
FOXN3O00409 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXN3O00409 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXN3O00409 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
FOXN3O00409 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
FOXN3O00409 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
FOXN3O00409 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXN3O00409 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXN3O00409 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.39■□□□□ 0.53
FOXN3O00409 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXN3O00409 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
FOXN3O00409 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.39■□□□□ 0.53
FOXN3O00409 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.39■□□□□ 0.53
FOXN3O00409 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.39■□□□□ 0.53
FOXN3O00409 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.39■□□□□ 0.53
FOXN3O00409 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.39■□□□□ 0.53
FOXN3O00409 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXN3O00409 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
FOXN3O00409 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXN3O00409 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
FOXN3O00409 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.39■□□□□ 0.53
FOXN3O00409 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXN3O00409 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXN3O00409 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXN3O00409 AL356309.3-201ENST00000624132 1934 ntBASIC18.39■□□□□ 0.53
FOXN3O00409 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXN3O00409 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXN3O00409 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
FOXN3O00409 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
FOXN3O00409 AC124067.4-201ENST00000519691 2379 ntBASIC18.38■□□□□ 0.53
FOXN3O00409 PCDHB17P-201ENST00000539533 2393 ntBASIC18.38■□□□□ 0.53
FOXN3O00409 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN3O00409 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
FOXN3O00409 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN3O00409 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN3O00409 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN3O00409 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN3O00409 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN3O00409 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN3O00409 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.38■□□□□ 0.53
FOXN3O00409 PRELID1P1-202ENST00000567272 903 ntBASIC18.38■□□□□ 0.53
FOXN3O00409 AL355877.3-201ENST00000622820 899 ntBASIC18.38■□□□□ 0.53
FOXN3O00409 AC012313.10-201ENST00000623509 926 ntBASIC18.38■□□□□ 0.53
FOXN3O00409 AL022326.1-202ENST00000641533 845 ntBASIC18.38■□□□□ 0.53
FOXN3O00409 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN3O00409 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN3O00409 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN3O00409 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
FOXN3O00409 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN3O00409 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN3O00409 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN3O00409 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN3O00409 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.38■□□□□ 0.53
FOXN3O00409 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.38■□□□□ 0.53
FOXN3O00409 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN3O00409 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN3O00409 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN3O00409 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN3O00409 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.38■□□□□ 0.53
FOXN3O00409 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.38■□□□□ 0.53
FOXN3O00409 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN3O00409 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
FOXN3O00409 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN3O00409 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.37■□□□□ 0.53
FOXN3O00409 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN3O00409 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN3O00409 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXN3O00409 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN3O00409 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN3O00409 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN3O00409 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
FOXN3O00409 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.37■□□□□ 0.53
FOXN3O00409 FGFR3P6-201ENST00000457012 610 ntBASIC18.37■□□□□ 0.53
FOXN3O00409 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXN3O00409 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN3O00409 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN3O00409 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.37■□□□□ 0.53
FOXN3O00409 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXN3O00409 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
FOXN3O00409 AL353135.1-201ENST00000606729 504 ntBASIC18.37■□□□□ 0.53
FOXN3O00409 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.37■□□□□ 0.53
FOXN3O00409 AL590787.1-201ENST00000568856 1315 ntBASIC18.37■□□□□ 0.53
FOXN3O00409 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms