Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA3F8WFD2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA3F8WFD2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA3F8WFD2 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.68■□□□□ 0.1
NPIPA3F8WFD2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
NPIPA3F8WFD2 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA3F8WFD2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 MIR3687-2-201ENST00000577708 61 ntBASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 MIR4751-201ENST00000578027 74 ntBASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 MIR3687-1-201ENST00000614492 61 ntBASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NPIPA3F8WFD2 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 AC009336.1-201ENST00000608941 1553 ntBASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 YBX2P1-201ENST00000394192 760 ntBASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 CRYGEP-201ENST00000412192 528 ntBASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 UPF3AP3-201ENST00000420996 769 ntBASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 RPS15P9-201ENST00000494093 319 ntBASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 AL691403.2-201ENST00000618460 490 ntBASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA3F8WFD2 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms