Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV5-3A0A0A0MS03 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.09■□□□□ 0.17
TRBV5-3A0A0A0MS03 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV5-3A0A0A0MS03 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
TRBV5-3A0A0A0MS03 VENTXP7-201ENST00000475503 772 ntBASIC16.09■□□□□ 0.17
TRBV5-3A0A0A0MS03 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.09■□□□□ 0.17
TRBV5-3A0A0A0MS03 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.09■□□□□ 0.17
TRBV5-3A0A0A0MS03 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.09■□□□□ 0.17
TRBV5-3A0A0A0MS03 LINC01023-201ENST00000606054 436 ntBASIC16.09■□□□□ 0.17
TRBV5-3A0A0A0MS03 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV5-3A0A0A0MS03 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV5-3A0A0A0MS03 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV5-3A0A0A0MS03 AC016734.2-201ENST00000624325 1377 ntBASIC16.09■□□□□ 0.17
TRBV5-3A0A0A0MS03 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV5-3A0A0A0MS03 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV5-3A0A0A0MS03 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV5-3A0A0A0MS03 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV5-3A0A0A0MS03 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV5-3A0A0A0MS03 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV5-3A0A0A0MS03 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV5-3A0A0A0MS03 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV5-3A0A0A0MS03 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.08■□□□□ 0.17
TRBV5-3A0A0A0MS03 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV5-3A0A0A0MS03 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV5-3A0A0A0MS03 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV5-3A0A0A0MS03 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV5-3A0A0A0MS03 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV5-3A0A0A0MS03 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.08■□□□□ 0.16
TRBV5-3A0A0A0MS03 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TRBV5-3A0A0A0MS03 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV5-3A0A0A0MS03 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.08■□□□□ 0.16
TRBV5-3A0A0A0MS03 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV5-3A0A0A0MS03 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.08■□□□□ 0.16
TRBV5-3A0A0A0MS03 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TRBV5-3A0A0A0MS03 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TRBV5-3A0A0A0MS03 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.08■□□□□ 0.16
TRBV5-3A0A0A0MS03 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.08■□□□□ 0.16
TRBV5-3A0A0A0MS03 HLA-J-202ENST00000469281 1241 ntBASIC16.08■□□□□ 0.16
TRBV5-3A0A0A0MS03 LINC01238-205ENST00000567549 1107 ntBASIC16.08■□□□□ 0.16
TRBV5-3A0A0A0MS03 BNIP3P18-201ENST00000593976 575 ntBASIC16.08■□□□□ 0.16
TRBV5-3A0A0A0MS03 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TRBV5-3A0A0A0MS03 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TRBV5-3A0A0A0MS03 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.08■□□□□ 0.16
TRBV5-3A0A0A0MS03 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
TRBV5-3A0A0A0MS03 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV5-3A0A0A0MS03 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TRBV5-3A0A0A0MS03 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.08■□□□□ 0.16
TRBV5-3A0A0A0MS03 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.08■□□□□ 0.16
TRBV5-3A0A0A0MS03 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV5-3A0A0A0MS03 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TRBV5-3A0A0A0MS03 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.08■□□□□ 0.16
TRBV5-3A0A0A0MS03 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV5-3A0A0A0MS03 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TRBV5-3A0A0A0MS03 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.08■□□□□ 0.16
TRBV5-3A0A0A0MS03 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TRBV5-3A0A0A0MS03 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV5-3A0A0A0MS03 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 AC004817.3-201ENST00000602957 2129 ntBASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 RN7SL850P-201ENST00000579959 291 ntBASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 AP000867.4-201ENST00000641616 219 ntBASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 AC233702.3-201ENST00000578656 1387 ntBASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV5-3A0A0A0MS03 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms