Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 AL662844.4-201ENST00000606367 2838 ntBASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 AC024243.1-201ENST00000609234 778 ntBASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB1Q9Y5G3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 FITM1-202ENST00000559294 800 ntBASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 NAPSB-206ENST00000562112 1266 ntBASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 AC087388.1-201ENST00000571370 1112 ntBASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 NEK4P2-201ENST00000580004 1012 ntBASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 NTF6B-201ENST00000591913 560 ntBASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms