Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB6Q9Y5F9 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB6Q9Y5F9 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB6Q9Y5F9 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB6Q9Y5F9 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGB6Q9Y5F9 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB6Q9Y5F9 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB6Q9Y5F9 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB6Q9Y5F9 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB6Q9Y5F9 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB6Q9Y5F9 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGB6Q9Y5F9 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB6Q9Y5F9 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGB6Q9Y5F9 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGB6Q9Y5F9 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGB6Q9Y5F9 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGB6Q9Y5F9 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
PCDHGB6Q9Y5F9 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGB6Q9Y5F9 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGB6Q9Y5F9 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGB6Q9Y5F9 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGB6Q9Y5F9 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGB6Q9Y5F9 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGB6Q9Y5F9 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB6Q9Y5F9 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB6Q9Y5F9 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB6Q9Y5F9 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB6Q9Y5F9 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB6Q9Y5F9 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGB6Q9Y5F9 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGB6Q9Y5F9 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.33■□□□□ 0.2
PCDHGB6Q9Y5F9 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGB6Q9Y5F9 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.33■□□□□ 0.2
PCDHGB6Q9Y5F9 AC117500.6-201ENST00000624871 588 ntBASIC16.33■□□□□ 0.2
PCDHGB6Q9Y5F9 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGB6Q9Y5F9 UBALD1-205ENST00000590891 2641 ntBASIC16.33■□□□□ 0.2
PCDHGB6Q9Y5F9 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB6Q9Y5F9 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PCDHGB6Q9Y5F9 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGB6Q9Y5F9 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PCDHGB6Q9Y5F9 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB6Q9Y5F9 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB6Q9Y5F9 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGB6Q9Y5F9 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB6Q9Y5F9 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB6Q9Y5F9 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGB6Q9Y5F9 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB6Q9Y5F9 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB6Q9Y5F9 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB6Q9Y5F9 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 FAM220CP-201ENST00000395253 831 ntBASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 IL9RP2-201ENST00000423948 1312 ntBASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 PCDH8P1-201ENST00000428983 2773 ntBASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 PMS2P1-201ENST00000431037 1228 ntBASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PCDHGB6Q9Y5F9 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PCDHGB6Q9Y5F9 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB6Q9Y5F9 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGB6Q9Y5F9 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB6Q9Y5F9 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGB6Q9Y5F9 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB6Q9Y5F9 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
PCDHGB6Q9Y5F9 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB6Q9Y5F9 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB6Q9Y5F9 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB6Q9Y5F9 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.31■□□□□ 0.2
PCDHGB6Q9Y5F9 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms