Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
NINLQ9Y2I6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC23.37■■□□□ 1.33
NINLQ9Y2I6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC23.36■■□□□ 1.33
NINLQ9Y2I6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC23.36■■□□□ 1.33
NINLQ9Y2I6 AC026471.1-201ENST00000564629 3026 ntBASIC23.36■■□□□ 1.33
NINLQ9Y2I6 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
NINLQ9Y2I6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NINLQ9Y2I6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NINLQ9Y2I6 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NINLQ9Y2I6 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NINLQ9Y2I6 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC23.36■■□□□ 1.33
NINLQ9Y2I6 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NINLQ9Y2I6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
NINLQ9Y2I6 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NINLQ9Y2I6 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
NINLQ9Y2I6 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
NINLQ9Y2I6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC23.36■■□□□ 1.33
NINLQ9Y2I6 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC23.36■■□□□ 1.33
NINLQ9Y2I6 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
NINLQ9Y2I6 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC23.36■■□□□ 1.33
NINLQ9Y2I6 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
NINLQ9Y2I6 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
NINLQ9Y2I6 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
NINLQ9Y2I6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC23.36■■□□□ 1.33
NINLQ9Y2I6 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC23.36■■□□□ 1.33
NINLQ9Y2I6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC23.36■■□□□ 1.33
NINLQ9Y2I6 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
NINLQ9Y2I6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC23.35■■□□□ 1.33
NINLQ9Y2I6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC23.35■■□□□ 1.33
NINLQ9Y2I6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC23.35■■□□□ 1.33
NINLQ9Y2I6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NINLQ9Y2I6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NINLQ9Y2I6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
NINLQ9Y2I6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
NINLQ9Y2I6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
NINLQ9Y2I6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NINLQ9Y2I6 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NINLQ9Y2I6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NINLQ9Y2I6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC23.35■■□□□ 1.33
NINLQ9Y2I6 AC067852.2-201ENST00000590513 2313 ntBASIC23.35■■□□□ 1.33
NINLQ9Y2I6 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
NINLQ9Y2I6 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NINLQ9Y2I6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
NINLQ9Y2I6 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NINLQ9Y2I6 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC23.35■■□□□ 1.33
NINLQ9Y2I6 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
NINLQ9Y2I6 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
NINLQ9Y2I6 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC23.35■■□□□ 1.33
NINLQ9Y2I6 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC23.35■■□□□ 1.33
NINLQ9Y2I6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NINLQ9Y2I6 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC23.35■■□□□ 1.33
NINLQ9Y2I6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC23.35■■□□□ 1.33
NINLQ9Y2I6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
NINLQ9Y2I6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NINLQ9Y2I6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NINLQ9Y2I6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
NINLQ9Y2I6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
NINLQ9Y2I6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NINLQ9Y2I6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC23.34■■□□□ 1.33
NINLQ9Y2I6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC23.34■■□□□ 1.33
NINLQ9Y2I6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC23.34■■□□□ 1.33
NINLQ9Y2I6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NINLQ9Y2I6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
NINLQ9Y2I6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC23.34■■□□□ 1.33
NINLQ9Y2I6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NINLQ9Y2I6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
NINLQ9Y2I6 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC23.34■■□□□ 1.33
NINLQ9Y2I6 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC23.34■■□□□ 1.33
NINLQ9Y2I6 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC23.34■■□□□ 1.33
NINLQ9Y2I6 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC23.34■■□□□ 1.33
NINLQ9Y2I6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
NINLQ9Y2I6 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
NINLQ9Y2I6 AC022145.2-201ENST00000598203 171 ntBASIC23.34■■□□□ 1.33
NINLQ9Y2I6 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
NINLQ9Y2I6 AC105339.1-204ENST00000636249 355 ntBASIC23.34■■□□□ 1.33
NINLQ9Y2I6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC23.34■■□□□ 1.33
NINLQ9Y2I6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
NINLQ9Y2I6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
NINLQ9Y2I6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
NINLQ9Y2I6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
NINLQ9Y2I6 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
NINLQ9Y2I6 SLC22A20-204ENST00000530038 1673 ntBASIC23.33■■□□□ 1.33
NINLQ9Y2I6 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC23.33■■□□□ 1.33
NINLQ9Y2I6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NINLQ9Y2I6 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NINLQ9Y2I6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC23.33■■□□□ 1.33
NINLQ9Y2I6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC23.33■■□□□ 1.33
NINLQ9Y2I6 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.33
NINLQ9Y2I6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NINLQ9Y2I6 HMGA1P7-201ENST00000406908 502 ntBASIC23.33■■□□□ 1.33
NINLQ9Y2I6 RN7SL589P-201ENST00000481268 310 ntBASIC23.33■■□□□ 1.33
NINLQ9Y2I6 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC23.33■■□□□ 1.33
NINLQ9Y2I6 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC23.33■■□□□ 1.33
NINLQ9Y2I6 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC23.33■■□□□ 1.33
NINLQ9Y2I6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NINLQ9Y2I6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC23.33■■□□□ 1.33
NINLQ9Y2I6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
NINLQ9Y2I6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
NINLQ9Y2I6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
NINLQ9Y2I6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms