Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CALYQ9NYX4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.26□□□□□ -0.13
CALYQ9NYX4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CALYQ9NYX4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CALYQ9NYX4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CALYQ9NYX4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CALYQ9NYX4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CALYQ9NYX4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.26□□□□□ -0.13
CALYQ9NYX4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CALYQ9NYX4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CALYQ9NYX4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CALYQ9NYX4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.26□□□□□ -0.13
CALYQ9NYX4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CALYQ9NYX4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CALYQ9NYX4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CALYQ9NYX4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CALYQ9NYX4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
CALYQ9NYX4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CALYQ9NYX4 AC092053.1-201ENST00000605787 1936 ntBASIC14.25□□□□□ -0.13
CALYQ9NYX4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CALYQ9NYX4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CALYQ9NYX4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CALYQ9NYX4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CALYQ9NYX4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CALYQ9NYX4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CALYQ9NYX4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CALYQ9NYX4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CALYQ9NYX4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CALYQ9NYX4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CALYQ9NYX4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.25□□□□□ -0.13
CALYQ9NYX4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CALYQ9NYX4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CALYQ9NYX4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CALYQ9NYX4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CALYQ9NYX4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CALYQ9NYX4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CALYQ9NYX4 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.25□□□□□ -0.13
CALYQ9NYX4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CALYQ9NYX4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.25□□□□□ -0.13
CALYQ9NYX4 KRT18P31-201ENST00000506277 1292 ntBASIC14.25□□□□□ -0.13
CALYQ9NYX4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.25□□□□□ -0.13
CALYQ9NYX4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.25□□□□□ -0.13
CALYQ9NYX4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.25□□□□□ -0.13
CALYQ9NYX4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.25□□□□□ -0.13
CALYQ9NYX4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CALYQ9NYX4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CALYQ9NYX4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CALYQ9NYX4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
CALYQ9NYX4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CALYQ9NYX4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CALYQ9NYX4 AC009053.2-201ENST00000563701 2365 ntBASIC14.25□□□□□ -0.13
CALYQ9NYX4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CALYQ9NYX4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CALYQ9NYX4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CALYQ9NYX4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CALYQ9NYX4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.25□□□□□ -0.13
CALYQ9NYX4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CALYQ9NYX4 GPR89P-201ENST00000407924 1495 ntBASIC14.25□□□□□ -0.13
CALYQ9NYX4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.25□□□□□ -0.13
CALYQ9NYX4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CALYQ9NYX4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
CALYQ9NYX4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CALYQ9NYX4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
CALYQ9NYX4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CALYQ9NYX4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CALYQ9NYX4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CALYQ9NYX4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CALYQ9NYX4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.24□□□□□ -0.13
CALYQ9NYX4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.24□□□□□ -0.13
CALYQ9NYX4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CALYQ9NYX4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
CALYQ9NYX4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CALYQ9NYX4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.24□□□□□ -0.13
CALYQ9NYX4 AC097637.2-201ENST00000624096 1997 ntBASIC14.24□□□□□ -0.13
CALYQ9NYX4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CALYQ9NYX4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
CALYQ9NYX4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CALYQ9NYX4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CALYQ9NYX4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CALYQ9NYX4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CALYQ9NYX4 RBM17P3-201ENST00000417687 1192 ntBASIC14.24□□□□□ -0.13
CALYQ9NYX4 ACTG1P4-201ENST00000425123 1122 ntBASIC14.24□□□□□ -0.13
CALYQ9NYX4 AC106795.1-205ENST00000512851 1056 ntBASIC14.24□□□□□ -0.13
CALYQ9NYX4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CALYQ9NYX4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.24□□□□□ -0.13
CALYQ9NYX4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.24□□□□□ -0.13
CALYQ9NYX4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CALYQ9NYX4 AC124947.2-201ENST00000547118 1133 ntBASIC14.24□□□□□ -0.13
CALYQ9NYX4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.24□□□□□ -0.13
CALYQ9NYX4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.24□□□□□ -0.13
CALYQ9NYX4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
CALYQ9NYX4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CALYQ9NYX4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CALYQ9NYX4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CALYQ9NYX4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CALYQ9NYX4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CALYQ9NYX4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.24□□□□□ -0.13
CALYQ9NYX4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.24□□□□□ -0.13
CALYQ9NYX4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CALYQ9NYX4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms