Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
FOXD4L1Q9NU39 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC20.82■□□□□ 0.92
FOXD4L1Q9NU39 AC116353.5-201ENST00000638148 1699 ntBASIC20.82■□□□□ 0.92
FOXD4L1Q9NU39 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FOXD4L1Q9NU39 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
FOXD4L1Q9NU39 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC20.82■□□□□ 0.92
FOXD4L1Q9NU39 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FOXD4L1Q9NU39 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC20.82■□□□□ 0.92
FOXD4L1Q9NU39 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 HMGA1P5-201ENST00000412453 271 ntBASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 DEFT1P-201ENST00000453425 496 ntBASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 LYRM2-204ENST00000520441 791 ntTSL 3 BASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 NEK4P2-201ENST00000580004 1012 ntBASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 AC092574.1-201ENST00000609771 420 ntBASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 AL662844.4-201ENST00000606367 2838 ntBASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.81■□□□□ 0.92
FOXD4L1Q9NU39 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 KRT17P2-201ENST00000300992 1314 ntBASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 AC106872.6-201ENST00000514228 1346 ntBASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 AC113404.2-201ENST00000507884 177 ntBASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 AC020656.1-201ENST00000548900 599 ntTSL 3 BASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 AP001099.1-201ENST00000579385 855 ntTSL 5 BASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 AL162390.1-201ENST00000622201 1246 ntBASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FOXD4L1Q9NU39 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC20.79■□□□□ 0.92
FOXD4L1Q9NU39 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXD4L1Q9NU39 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXD4L1Q9NU39 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXD4L1Q9NU39 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
FOXD4L1Q9NU39 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXD4L1Q9NU39 MMP23A-201ENST00000234610 1017 ntBASIC20.79■□□□□ 0.92
FOXD4L1Q9NU39 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXD4L1Q9NU39 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.79■□□□□ 0.92
FOXD4L1Q9NU39 ECEL1P3-201ENST00000427961 737 ntBASIC20.79■□□□□ 0.92
FOXD4L1Q9NU39 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC20.79■□□□□ 0.92
FOXD4L1Q9NU39 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC20.79■□□□□ 0.92
FOXD4L1Q9NU39 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
FOXD4L1Q9NU39 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
FOXD4L1Q9NU39 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.79■□□□□ 0.92
FOXD4L1Q9NU39 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
FOXD4L1Q9NU39 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
FOXD4L1Q9NU39 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
FOXD4L1Q9NU39 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXD4L1Q9NU39 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXD4L1Q9NU39 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms