Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.77■□□□□ 0.12
CHD8Q9HCK8 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
CHD8Q9HCK8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHD8Q9HCK8 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHD8Q9HCK8 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CHD8Q9HCK8 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CHD8Q9HCK8 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHD8Q9HCK8 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHD8Q9HCK8 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC15.77■□□□□ 0.12
CHD8Q9HCK8 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.77■□□□□ 0.12
CHD8Q9HCK8 IGHV3-52-201ENST00000519770 353 ntBASIC15.77■□□□□ 0.12
CHD8Q9HCK8 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.77■□□□□ 0.12
CHD8Q9HCK8 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.77■□□□□ 0.12
CHD8Q9HCK8 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CHD8Q9HCK8 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.77■□□□□ 0.12
CHD8Q9HCK8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHD8Q9HCK8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHD8Q9HCK8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC15.77■□□□□ 0.11
CHD8Q9HCK8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHD8Q9HCK8 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.11
CHD8Q9HCK8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHD8Q9HCK8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
CHD8Q9HCK8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CHD8Q9HCK8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHD8Q9HCK8 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHD8Q9HCK8 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHD8Q9HCK8 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CHD8Q9HCK8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.77■□□□□ 0.11
CHD8Q9HCK8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.77■□□□□ 0.11
CHD8Q9HCK8 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.77■□□□□ 0.11
CHD8Q9HCK8 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.77■□□□□ 0.11
CHD8Q9HCK8 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.77■□□□□ 0.11
CHD8Q9HCK8 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.77■□□□□ 0.11
CHD8Q9HCK8 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.77■□□□□ 0.11
CHD8Q9HCK8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHD8Q9HCK8 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 RNU1-129P-201ENST00000384064 167 ntBASIC15.76■□□□□ 0.11
CHD8Q9HCK8 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 U1.21-201ENST00000580816 167 ntBASIC15.76■□□□□ 0.11
CHD8Q9HCK8 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.76■□□□□ 0.11
CHD8Q9HCK8 AC009542.2-202ENST00000619004 1067 ntBASIC15.76■□□□□ 0.11
CHD8Q9HCK8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.76■□□□□ 0.11
CHD8Q9HCK8 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 IGF1-203ENST00000392904 761 ntTSL 5 BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 AC006033.1-201ENST00000440505 426 ntBASIC15.76■□□□□ 0.11
CHD8Q9HCK8 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 ACTG1P17-201ENST00000558391 1119 ntBASIC15.76■□□□□ 0.11
CHD8Q9HCK8 MIR5572-201ENST00000583188 137 ntBASIC15.76■□□□□ 0.11
CHD8Q9HCK8 AC148477.9-201ENST00000623974 539 ntBASIC15.76■□□□□ 0.11
CHD8Q9HCK8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHD8Q9HCK8 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHD8Q9HCK8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHD8Q9HCK8 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHD8Q9HCK8 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.75■□□□□ 0.11
CHD8Q9HCK8 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.75■□□□□ 0.11
CHD8Q9HCK8 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHD8Q9HCK8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHD8Q9HCK8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHD8Q9HCK8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHD8Q9HCK8 KRT8P19-201ENST00000551916 1455 ntBASIC15.75■□□□□ 0.11
CHD8Q9HCK8 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHD8Q9HCK8 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHD8Q9HCK8 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.75■□□□□ 0.11
CHD8Q9HCK8 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.75■□□□□ 0.11
CHD8Q9HCK8 KLF2P4-201ENST00000451959 1225 ntBASIC15.75■□□□□ 0.11
CHD8Q9HCK8 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.75■□□□□ 0.11
CHD8Q9HCK8 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHD8Q9HCK8 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms